CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plastid, plasma membrane

Predictor Summary:

plastid 3
golgi 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005131.1-P	Field mustard	plasma membrane	99.78	99.78
CDX91434	Canola	plasma membrane	99.35	99.35
CDX93324	Canola	plasma membrane	95.91	95.91
CDY18402	Canola	plasma membrane	95.48	95.48
AT2G38170.3	Thale cress	plasma membrane, plastid	84.73	82.95
CDY29050	Canola	golgi, plasma membrane, plastid	73.76	80.71
CDX90630	Canola	golgi, peroxisome, plasma membrane, plastid	77.85	78.7
KRH38810	Soybean	extracellular, golgi, vacuole	38.49	72.76
VIT_08s0007g02240.t01	Wine grape	golgi, peroxisome, plasma membrane	69.03	71.65
KRH00226	Soybean	plastid	68.82	71.27
KRH65744	Soybean	golgi, peroxisome, plasma membrane	69.03	71.18
KRH75989	Soybean	golgi, peroxisome, plasma membrane	69.46	70.83
Solyc09g005260.2.1	Tomato	plastid	69.03	70.7
KRH49368	Soybean	plastid	68.17	70.6
PGSC0003DMT400030772	Potato	plasma membrane, plastid	69.03	70.39
KRH65739	Soybean	plastid	66.24	69.06
GSMUA_Achr3P29210_001	Banana	golgi, peroxisome, plasma membrane	64.09	65.07
GSMUA_Achr4P06590_001	Banana	cytosol, golgi, peroxisome	50.11	62.97
TraesCS2A01G444600.1	Wheat	plasma membrane	58.28	62.3
OQU86993	Sorghum	plasma membrane	40.65	60.97
TraesCS2D01G443700.2	Wheat	plasma membrane	57.63	60.63
Os01t0557500-01	Rice	vacuole	58.71	60.53
HORVU2Hr1G102840.16	Barley	endoplasmic reticulum, plasma membrane	59.14	60.44
TraesCS3D01G206400.1	Wheat	plastid	59.78	60.17
TraesCS3A01G202800.1	Wheat	plastid	59.35	59.74
Zm00001d044533_P003	Maize	golgi, mitochondrion, peroxisome, plasma membrane, plastid	58.92	59.31
TraesCS2B01G465600.1	Wheat	plastid	58.28	58.91
Os05t0594200-01	Rice	plastid	57.2	58.72
GSMUA_Achr8P19620_001	Banana	plasma membrane	50.75	56.87
HORVU3Hr1G049060.8	Barley	endoplasmic reticulum, peroxisome, plasma membrane, plastid	56.34	55.27
CDY40303	Canola	plastid	56.77	54.1
KXG22713	Sorghum	plasma membrane	58.06	53.78
CDY10497	Canola	plastid	43.66	52.45
Zm00001d009763_P001	Maize	cytosol, mitochondrion, plasma membrane, plastid	58.06	52.33
Os02t0314300-00	Rice	cytosol, peroxisome, vacuole	49.25	50.89
Zm00001d009397_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	10.32	50.0
EES04904	Sorghum	cytosol, peroxisome, vacuole	48.17	48.91
CDY42379	Canola	plasma membrane	41.29	46.72
CDY10539	Canola	plasma membrane	40.86	46.23
CDY23589	Canola	golgi, peroxisome, plasma membrane	41.51	45.41
CDY24195	Canola	golgi, peroxisome, plasma membrane	42.37	44.87
CDY43356	Canola	golgi, peroxisome, plasma membrane	41.94	44.12
CDY44007	Canola	cytosol, peroxisome, plasma membrane	41.72	44.09
CDY26090	Canola	plasma membrane	40.43	42.63
CDX75703	Canola	peroxisome	42.15	42.61
CDX82545	Canola	mitochondrion	42.15	39.2

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	GO:A0A078CIM0	InterPro:CAX	EnsemblPlants:CDX74903
ProteinID:CDX74903	ProteinID:CDX74903.1	InterPro:CaH_exchang	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150	GO:GO:0008324	GO:GO:0015369
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00116903001	InterPro:NaCa_Exmemb	PFAM:PF01699
PANTHER:PTHR31503	PANTHER:PTHR31503:SF33	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846	TMHMM:TMhelix	UniParc:UPI0004EF11F2
SEG:seg	:	:	:	:	:

Description

BnaA05g06490D

Coordinates

chrLK031802:+:1372571..1376445

Molecular Weight (calculated)

50290.8 Da

IEP (calculated)

5.603

GRAVY (calculated)

0.563

Length

465 amino acids

Sequence
(BLAST)

001: MAGIVEQWSA AENGNANMTA KGSSRELRHG GRTAHNMSSS SLRKKSDIRV IQKVPYKGLK DFLSNLQEVI LGTKLAILFP AIPAAIIGTY CGFSQPWIFG
101: LSMLGLTPLA ERVSFLTEQL AFYTGPTLGG LLNATCGNAT ELIIAILALT NNKVAVVKYS LLGSILSNLL LVLGTSLFCG GIANLRREQR FDRKQADVNF
201: FLLLMGLLCH LLPMLFGYVA NGETPAGLIA DMSLNLSRAS SIVMLIAYIA YLVFQLWTHR QLFDAQDEDD EYDDNVAEEE TAVISFWSGF AWLVGMTLVI
301: ALLSEYVVAT IENASESWGL SVSFISIILL PIVGNAAEHA GAIIFAFKNK LDISLGVALG SATQIGLFVV PLTVIVAWIL GINMDLNFNL LETGSLALSI
401: IITAFTLQDG TSHYMKGLVL LLCYIIIAIC FFVDKLPQKQ PNAIHLGHQL MNNVAAANGE GVFSS

Best Arabidopsis Sequence Match ( AT2G38170.1 )
(BLAST)

001: MAGIVTEPWS VAENGNPSIT AKGSSRELRL GRTAHNMSSS SLRKKSDLRV IQKVPYKGLK DFLSNLQEVI LGTKLAILFP AIPAAIICTY CGVSQPWIFG
101: LSLLGLTPLA ERVSFLTEQL AFYTGPTLGG LLNATCGNAT ELIIAILALT NNKVAVVKYS LLGSILSNLL LVLGTSLFCG GIANIRREQR FDRKQADVNF
201: FLLLLGFLCH LLPLLVGYLK NGEASAAVLS DMQLSISRGF SIVMLISYIA YLVFQLWTHR QLFDAQEQED EYDDDVEQET AVISFWSGFA WLVGMTLVIA
301: LLSEYVVATI EEASDKWNLS VSFISIILLP IVGNAAEHAG AVIFAFKNKL DISLGVALGS ATQIGLFVVP LTIIVAWILG INMDLNFGPL ETGCLAVSII
401: ITAFTLQDGS SHYMKGLVLL LCYFIIAICF FVDKLPQKQN AIHLGHQAMN NVVTATGGGV FSS

Arabidopsis Description

CAX1AT2G38170 protein [Source:UniProtKB/TrEMBL;Acc:B9DFT4]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.