CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

nucleus 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	golgi, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24195	Canola	golgi, peroxisome, plasma membrane	97.51	98.18
CDY23589	Canola	golgi, peroxisome, plasma membrane	88.46	92.0
CDY44007	Canola	cytosol, peroxisome, plasma membrane	91.4	91.82
AT3G13320.1	Thale cress	golgi, peroxisome, vacuole	90.5	90.7
Bra039385.1-P	Field mustard	plasma membrane	96.61	90.47
CDX75703	Canola	peroxisome	91.86	88.26
CDY42379	Canola	plasma membrane	75.79	81.51
CDX82545	Canola	mitochondrion	92.08	81.4
CDY10539	Canola	plasma membrane	75.11	80.78
CDY26090	Canola	plasma membrane	78.73	78.91
KRH58038	Soybean	plasma membrane	50.68	74.42
KRH46490	Soybean	golgi, peroxisome, plasma membrane	66.74	68.93
VIT_19s0015g01320.t01	Wine grape	cytosol, peroxisome, vacuole	69.23	68.61
GSMUA_Achr5P05070_001	Banana	cytosol, peroxisome, plasma membrane	67.65	66.15
Os02t0138900-01	Rice	golgi, plasma membrane	37.56	66.14
KRG98412	Soybean	plasma membrane	66.97	65.34
EES06255	Sorghum	golgi, peroxisome, plasma membrane	57.92	59.67
GSMUA_Achr3P05320_001	Banana	cytosol, peroxisome, plasma membrane	61.76	59.48
TraesCS6D01G096900.1	Wheat	mitochondrion	59.73	57.64
TraesCS6B01G137200.1	Wheat	mitochondrion	58.82	56.77
TraesCS6A01G108700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, peroxisome	59.28	53.69
KRH47395	Soybean	mitochondrion	23.53	47.06
CDY29050	Canola	golgi, plasma membrane, plastid	44.12	45.88
CDX90630	Canola	golgi, peroxisome, plasma membrane, plastid	45.48	43.7
Zm00001d015225_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	45.93	42.03
CDX74903	Canola	golgi, peroxisome, plasma membrane, plastid	44.12	41.94
CDX91434	Canola	plasma membrane	43.89	41.72
CDY18402	Canola	plasma membrane	43.67	41.51
CDX93324	Canola	plasma membrane	43.67	41.51
CDY40303	Canola	plastid	42.53	38.52
KRH46489	Soybean	cytosol, peroxisome, plasma membrane	61.99	38.16
CDY10497	Canola	plastid	31.9	36.43

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	GO:A0A078I0J1	UniProt:A0A078I0J1	InterPro:CAX
EnsemblPlants:CDY43356	ProteinID:CDY43356	ProteinID:CDY43356.1	InterPro:CaH_exchang	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150	GO:GO:0008324
GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0070588	GO:GO:0098655
EnsemblPlantsGene:GSBRNA2T00076422001	InterPro:NaCa_Exmemb	PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF34	TIGRFAMs:TIGR00378
TIGRFAMs:TIGR00846	TMHMM:TMhelix	UniParc:UPI0004EF35B1	:	:	:

Description

BnaA01g29870DBnaA01g29870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0J1]

Coordinates

chrLK032554:-:34844..37786

Molecular Weight (calculated)

48309.3 Da

IEP (calculated)

4.438

GRAVY (calculated)

0.546

Length

442 amino acids

Sequence
(BLAST)

001: MSHCNVPALI EPQVEMGSVD EAENKTLFKL EEDAKQTKEA SLMEQGSLSP TFPQHTTKSP KNTVLKSIRI VILSNKLNLL LPFGPLAILV HYMIDSKGWV
101: FLLSLIGITP LAERLGYATE QLAFYTGPTV GGLLNATFGN VTELIISIFA LKNGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFHQKD QVFDKGLAVV
201: NSGLLLMAVM GILFPAVLHY THSEVHAGSS ELALSRFSSC IMLIAYAAYL FFQLKSQSSS YSPLEEETNQ NEEASDEDED PEISKWESII WLSVLTAWVS
301: LLSGYLVDAI EGASVSWNIP IAFISVILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG EQMDLNFQLF ETAMLFITVI
401: VVAFFIQEGT SNYFKGLMLI LCYLIVAASF FVHEDPQQDG GI

Best Arabidopsis Sequence Match ( AT3G13320.1 )
(BLAST)

001: MSCCKVPVLI EAQVEMVSAN ELENKSLFRQ EEDATQTKEA SLMEQGSLST SFPQHTPKAP KNSVLNSIKI VIFCNKLNLL LPFGPLAILV HYMIDSKGWV
101: FLLTLVGITP LAERLGYATE QLACYTGPTV GGLLNATFGN VTELIISIFA LKNGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFYQKD QVFDKGIATV
201: NSGLLLMAVM GILFPAVLHY THSEVHAGSS ELALSRFSSC IMLIAYAAYL FFQLKSQSNS YSPLDEESNQ NEETSAEDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWNIP IAFISTILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG QQMDLNFQLF ETAMLFITVI
401: VVAFFLQEGS SNYFKGLMLI LCYLIVAASF FVHEDPHQDG I

Arabidopsis Description

CAX2Vacuolar cation/proton exchanger 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39254]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.