CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	plasma membrane
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017134.1-P	Field mustard	plasma membrane	99.78	99.78
CDX93324	Canola	plasma membrane	99.14	99.14
CDX74903	Canola	golgi, peroxisome, plasma membrane, plastid	95.48	95.48
CDX91434	Canola	plasma membrane	94.84	94.84
AT2G38170.3	Thale cress	plasma membrane, plastid	85.38	83.58
CDY29050	Canola	golgi, plasma membrane, plastid	73.98	80.94
CDX90630	Canola	golgi, peroxisome, plasma membrane, plastid	77.42	78.26
KRH38810	Soybean	extracellular, golgi, vacuole	38.06	71.95
KRH00226	Soybean	plastid	69.25	71.71
VIT_08s0007g02240.t01	Wine grape	golgi, peroxisome, plasma membrane	69.03	71.65
KRH65744	Soybean	golgi, peroxisome, plasma membrane	69.03	71.18
KRH75989	Soybean	golgi, peroxisome, plasma membrane	69.68	71.05
KRH49368	Soybean	plastid	68.39	70.82
Solyc09g005260.2.1	Tomato	plastid	68.82	70.48
PGSC0003DMT400030772	Potato	plasma membrane, plastid	69.03	70.39
KRH65739	Soybean	plastid	66.45	69.28
GSMUA_Achr3P29210_001	Banana	golgi, peroxisome, plasma membrane	63.66	64.63
GSMUA_Achr4P06590_001	Banana	cytosol, golgi, peroxisome	50.32	63.24
TraesCS2A01G444600.1	Wheat	plasma membrane	58.28	62.3
Os01t0557500-01	Rice	vacuole	59.14	60.98
TraesCS2D01G443700.2	Wheat	plasma membrane	57.63	60.63
TraesCS3D01G206400.1	Wheat	plastid	60.22	60.61
HORVU2Hr1G102840.16	Barley	endoplasmic reticulum, plasma membrane	59.14	60.44
OQU86993	Sorghum	plasma membrane	40.22	60.32
TraesCS3A01G202800.1	Wheat	plastid	59.78	60.17
Zm00001d044533_P003	Maize	golgi, mitochondrion, peroxisome, plasma membrane, plastid	58.92	59.31
TraesCS2B01G465600.1	Wheat	plastid	58.28	58.91
Os05t0594200-01	Rice	plastid	56.77	58.28
GSMUA_Achr8P19620_001	Banana	plasma membrane	50.97	57.11
HORVU3Hr1G049060.8	Barley	endoplasmic reticulum, peroxisome, plasma membrane, plastid	56.56	55.49
KXG22713	Sorghum	plasma membrane	58.28	53.98
CDY40303	Canola	plastid	56.56	53.89
Zm00001d009763_P001	Maize	cytosol, mitochondrion, plasma membrane, plastid	58.28	52.52
CDY10497	Canola	plastid	43.66	52.45
Os02t0314300-00	Rice	cytosol, peroxisome, vacuole	49.89	51.56
EES04904	Sorghum	cytosol, peroxisome, vacuole	48.39	49.13
Zm00001d009397_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	9.89	47.92
CDY42379	Canola	plasma membrane	41.51	46.96
CDY10539	Canola	plasma membrane	40.65	45.99
CDY23589	Canola	golgi, peroxisome, plasma membrane	41.51	45.41
CDY24195	Canola	golgi, peroxisome, plasma membrane	41.94	44.42
CDY44007	Canola	cytosol, peroxisome, plasma membrane	41.51	43.86
CDY43356	Canola	golgi, peroxisome, plasma membrane	41.51	43.67
CDY26090	Canola	plasma membrane	40.22	42.4
CDX75703	Canola	peroxisome	41.94	42.39
CDX82545	Canola	mitochondrion	41.94	39.0

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	GO:A0A078G084	UniProt:A0A078G084	InterPro:CAX
EnsemblPlants:CDY18402	ProteinID:CDY18402	ProteinID:CDY18402.1	InterPro:CaH_exchang	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150	GO:GO:0008324
GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0070588	GO:GO:0098655
EnsemblPlantsGene:GSBRNA2T00005392001	InterPro:NaCa_Exmemb	PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF33	TIGRFAMs:TIGR00378
TIGRFAMs:TIGR00846	TMHMM:TMhelix	UniParc:UPI0004EDDBD2	SEG:seg	:	:

Description

BnaA04g21850DBnaA04g21850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G084]

Coordinates

chrLK032085:+:240685..244469

Molecular Weight (calculated)

50344.9 Da

IEP (calculated)

5.586

GRAVY (calculated)

0.589

Length

465 amino acids

Sequence
(BLAST)

001: MAGIVQEQWS AAENGNATMT AKGSSRELRH GGRTAHSMSS SSLRKKSDLR VIQKVPYKGL KEFLSNLQEV ILGTKLAILF PAIPAAIIGT YCGFSQPWIF
101: GLSLLGLTPL AERVSFLTEQ LAFYTGPTLG GLLNATCGNA TELIIAILAL TNHKVAVVKY SLLGSILSNL LLVLGTSLFC GGIANLRREQ RFDRKQADVN
201: FFLLLMGLLC HLLPMLFGYV GNGETSADLI ADMSLSLSRA SSIVMLISYI AYLVFQLWTH RQLFDAQDQE DEFDDNVEEE TAVIGFWSGF VWLVGMTLVI
301: ALLSEYVVAT IEEASESWGL SVSFISIILL PIVGNAAEHA GAIIFAFKNK LDISLGVALG SATQIGLFVV PLTIIVAWIL GINMDLNFNL LETGSLALSI
401: IITAFTLQDG TSHYMKGLVL LLCYIIIAIC FFVDKLPQKQ PNAVHLGHQL MNNVAAAVGE GVFSS

Best Arabidopsis Sequence Match ( AT2G38170.1 )
(BLAST)

001: MAGIVTEPWS VAENGNPSIT AKGSSRELRL GRTAHNMSSS SLRKKSDLRV IQKVPYKGLK DFLSNLQEVI LGTKLAILFP AIPAAIICTY CGVSQPWIFG
101: LSLLGLTPLA ERVSFLTEQL AFYTGPTLGG LLNATCGNAT ELIIAILALT NNKVAVVKYS LLGSILSNLL LVLGTSLFCG GIANIRREQR FDRKQADVNF
201: FLLLLGFLCH LLPLLVGYLK NGEASAAVLS DMQLSISRGF SIVMLISYIA YLVFQLWTHR QLFDAQEQED EYDDDVEQET AVISFWSGFA WLVGMTLVIA
301: LLSEYVVATI EEASDKWNLS VSFISIILLP IVGNAAEHAG AVIFAFKNKL DISLGVALGS ATQIGLFVVP LTIIVAWILG INMDLNFGPL ETGCLAVSII
401: ITAFTLQDGS SHYMKGLVLL LCYFIIAICF FVDKLPQKQN AIHLGHQAMN NVVTATGGGV FSS

Arabidopsis Description

CAX1AT2G38170 protein [Source:UniProtKB/TrEMBL;Acc:B9DFT4]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.