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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • plasma membrane 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:plasma membrane
PProwler:plastid
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74903 Canola golgi, peroxisome, plasma membrane, plastid 99.35 99.35
Bra005131.1-P Field mustard plasma membrane 99.14 99.14
CDX93324 Canola plasma membrane 95.27 95.27
CDY18402 Canola plasma membrane 94.84 94.84
AT2G38170.3 Thale cress plasma membrane, plastid 84.3 82.53
CDY29050 Canola golgi, plasma membrane, plastid 73.55 80.47
CDX90630 Canola golgi, peroxisome, plasma membrane, plastid 77.63 78.48
KRH38810 Soybean extracellular, golgi, vacuole 38.06 71.95
VIT_08s0007g02240.t01 Wine grape golgi, peroxisome, plasma membrane 69.03 71.65
KRH00226 Soybean plastid 68.39 70.82
KRH65744 Soybean golgi, peroxisome, plasma membrane 68.6 70.73
Solyc09g005260.2.1 Tomato plastid 69.03 70.7
KRH75989 Soybean golgi, peroxisome, plasma membrane 69.25 70.61
PGSC0003DMT400030772 Potato plasma membrane, plastid 69.03 70.39
KRH49368 Soybean plastid 67.74 70.16
KRH65739 Soybean plastid 66.02 68.83
GSMUA_Achr3P29210_001 Banana golgi, peroxisome, plasma membrane 63.87 64.85
GSMUA_Achr4P06590_001 Banana cytosol, golgi, peroxisome 50.11 62.97
TraesCS2A01G444600.1 Wheat plasma membrane 57.85 61.84
OQU86993 Sorghum plasma membrane 40.22 60.32
Os01t0557500-01 Rice vacuole 58.49 60.31
TraesCS2D01G443700.2 Wheat plasma membrane 57.2 60.18
HORVU2Hr1G102840.16 Barley endoplasmic reticulum, plasma membrane 58.71 60.0
TraesCS3D01G206400.1 Wheat plastid 59.57 59.96
TraesCS3A01G202800.1 Wheat plastid 59.14 59.52
Zm00001d044533_P003 Maize golgi, mitochondrion, peroxisome, plasma membrane, plastid 58.71 59.09
Os05t0594200-01 Rice plastid 56.99 58.5
TraesCS2B01G465600.1 Wheat plastid 57.85 58.48
GSMUA_Achr8P19620_001 Banana plasma membrane 50.54 56.63
HORVU3Hr1G049060.8 Barley endoplasmic reticulum, peroxisome, plasma membrane, plastid 56.13 55.06
CDY40303 Canola plastid 56.34 53.69
KXG22713 Sorghum plasma membrane 57.63 53.39
CDY10497 Canola plastid 43.66 52.45
Zm00001d009763_P001 Maize cytosol, mitochondrion, plasma membrane, plastid 57.85 52.13
Os02t0314300-00 Rice cytosol, peroxisome, vacuole 49.03 50.67
Zm00001d009397_P001 Maize endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 10.32 50.0
EES04904 Sorghum cytosol, peroxisome, vacuole 47.96 48.69
CDY42379 Canola plasma membrane 41.08 46.47
CDY10539 Canola plasma membrane 40.65 45.99
CDY23589 Canola golgi, peroxisome, plasma membrane 41.29 45.18
CDY24195 Canola golgi, peroxisome, plasma membrane 42.15 44.65
CDY43356 Canola golgi, peroxisome, plasma membrane 41.72 43.89
CDY44007 Canola cytosol, peroxisome, plasma membrane 41.51 43.86
CDY26090 Canola plasma membrane 40.22 42.4
CDX75703 Canola peroxisome 41.94 42.39
CDX82545 Canola mitochondrion 41.94 39.0
Protein Annotations
Gene3D:1.20.1420.30Gene3D:1.20.58.1130MapMan:24.2.9.1.1GO:A0A078DSE2InterPro:CAXEnsemblPlants:CDX91434
ProteinID:CDX91434ProteinID:CDX91434.1InterPro:CaH_exchangGO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006812GO:GO:0006816GO:GO:0008150GO:GO:0008324GO:GO:0015369
GO:GO:0016020GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00152750001InterPro:NaCa_ExmembPFAM:PF01699
PANTHER:PTHR31503PANTHER:PTHR31503:SF33TIGRFAMs:TIGR00378TIGRFAMs:TIGR00846TMHMM:TMhelixUniParc:UPI0004EED39C
SEG:seg:::::
Description
BnaC04g07160D
Coordinates
chrLK031867:-:850573..854178
Molecular Weight (calculated)
50296.8 Da
IEP (calculated)
5.856
GRAVY (calculated)
0.567
Length
465 amino acids
Sequence
(BLAST)
001: MAGIVEQWSA AENGNANMTA KGSSRELRHG GRTAHNMSSS SLRKKSDIRV IQKVPYKGLK DFLSNLQEVI LGTKLAILFP AIPAAIIGTY CGFSQPWIFG
101: LSMLGLTPLA ERVSFLTEQL AFYTGPTLGG LLNATCGNAT ELIIAILALT NNKVAVVKYS LLGSILSNLL LVLGTSLFCG GIANLRREQR FDRKQADVNF
201: FLLLMGLLCH LLPMLFGYVA NGETPAGLIA DMSLNLSRAS SIVMLIAYIA YLVFQLWTHR QLFDAQDEDD QYDDNVAEEE TAVISFWSGF AWLVGMTLVI
301: ALLSEYVVAT IENASESWGL SVSFISIILL PIVGNAAEHA GAIIFAFKNK LDISLGVALG SATQIGLFVV PLTVIVAWIL GINMDLNFSL LETGSLALSI
401: IITAFTLQDG TSHYMKGLVL FLCYIIIAIC FFVDKLPQKQ PNAIHLGHQL MNNVAAANGE GVFSS
Best Arabidopsis Sequence Match ( AT2G38170.1 )
(BLAST)
001: MAGIVTEPWS VAENGNPSIT AKGSSRELRL GRTAHNMSSS SLRKKSDLRV IQKVPYKGLK DFLSNLQEVI LGTKLAILFP AIPAAIICTY CGVSQPWIFG
101: LSLLGLTPLA ERVSFLTEQL AFYTGPTLGG LLNATCGNAT ELIIAILALT NNKVAVVKYS LLGSILSNLL LVLGTSLFCG GIANIRREQR FDRKQADVNF
201: FLLLLGFLCH LLPLLVGYLK NGEASAAVLS DMQLSISRGF SIVMLISYIA YLVFQLWTHR QLFDAQEQED EYDDDVEQET AVISFWSGFA WLVGMTLVIA
301: LLSEYVVATI EEASDKWNLS VSFISIILLP IVGNAAEHAG AVIFAFKNKL DISLGVALGS ATQIGLFVVP LTIIVAWILG INMDLNFGPL ETGCLAVSII
401: ITAFTLQDGS SHYMKGLVLL LCYFIIAICF FVDKLPQKQN AIHLGHQAMN NVVTATGGGV FSS
Arabidopsis Description
CAX1AT2G38170 protein [Source:UniProtKB/TrEMBL;Acc:B9DFT4]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.