Factsheet for Solyc09g005260.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
golgi 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400030772	Potato	plasma membrane, plastid	96.92	96.49
VIT_08s0007g02240.t01	Wine grape	golgi, peroxisome, plasma membrane	72.91	73.88
KRH38810	Soybean	extracellular, golgi, vacuole	39.87	73.58
KRH65744	Soybean	golgi, peroxisome, plasma membrane	70.93	71.4
KRH00226	Soybean	plastid	70.26	71.05
KRH65739	Soybean	plastid	69.16	70.4
KRH49368	Soybean	plastid	69.38	70.16
KRH75989	Soybean	golgi, peroxisome, plasma membrane	70.26	69.96
CDY29050	Canola	golgi, plasma membrane, plastid	65.2	69.65
CDX93324	Canola	plasma membrane	70.7	69.03
Bra005131.1-P	Field mustard	plasma membrane	70.7	69.03
Bra017134.1-P	Field mustard	plasma membrane	70.7	69.03
CDX91434	Canola	plasma membrane	70.7	69.03
CDX74903	Canola	golgi, peroxisome, plasma membrane, plastid	70.7	69.03
Solyc06g006110.2.1	Tomato	cytosol, peroxisome, plasma membrane	64.32	69.03
CDY18402	Canola	plasma membrane	70.48	68.82
Bra012833.1-P	Field mustard	golgi, plasma membrane, plastid	64.32	68.71
CDX90630	Canola	golgi, peroxisome, plasma membrane, plastid	68.06	67.17
TraesCS2A01G444600.1	Wheat	plasma membrane	64.32	67.13
GSMUA_Achr4P06590_001	Banana	cytosol, golgi, peroxisome	54.41	66.76
GSMUA_Achr3P29210_001	Banana	golgi, peroxisome, plasma membrane	66.96	66.38
TraesCS3A01G202800.1	Wheat	plastid	66.08	64.94
TraesCS3D01G206400.1	Wheat	plastid	65.86	64.72
HORVU2Hr1G102840.16	Barley	endoplasmic reticulum, plasma membrane	64.76	64.62
AT2G38170.3	Thale cress	plasma membrane, plastid	67.18	64.21
Os01t0557500-01	Rice	vacuole	63.44	63.86
TraesCS2D01G443700.2	Wheat	plasma membrane	61.89	63.57
AT3G51860.2	Thale cress	plastid	65.2	63.25
TraesCS2B01G465600.1	Wheat	plastid	63.88	63.04
OQU86993	Sorghum	plasma membrane	41.63	60.97
Zm00001d044533_P003	Maize	golgi, mitochondrion, peroxisome, plasma membrane, plastid	61.89	60.82
Os05t0594200-01	Rice	plastid	60.57	60.71
HORVU3Hr1G049060.8	Barley	endoplasmic reticulum, peroxisome, plasma membrane, plastid	61.45	58.86
GSMUA_Achr8P19620_001	Banana	plasma membrane	52.2	57.11
KXG22713	Sorghum	plasma membrane	62.78	56.77
AT5G01490.1	Thale cress	plastid	56.39	56.39
Zm00001d009763_P001	Maize	cytosol, mitochondrion, plasma membrane, plastid	62.33	54.84
Os02t0314300-00	Rice	cytosol, peroxisome, vacuole	53.52	54.0
CDY40303	Canola	plastid	56.83	52.87
EES04904	Sorghum	cytosol, peroxisome, vacuole	51.54	51.09
CDY10497	Canola	plastid	43.17	50.65
Bra009640.1-P	Field mustard	plastid	56.83	49.52
Solyc03g123790.2.1	Tomato	plasma membrane	41.63	49.35
Solyc12g011070.1.1	Tomato	plasma membrane	36.12	47.95
Zm00001d009397_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	10.13	47.92
Solyc12g055750.1.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	43.17	45.16
Solyc07g056110.2.1	Tomato	cytosol, peroxisome, plasma membrane	42.95	43.14
Solyc12g011080.1.1	Tomato	cytosol	4.63	24.71

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	InterPro:CAX	InterPro:CaH_exchang	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150	GO:GO:0008324	GO:GO:0009705
GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0070588	GO:GO:0098655
UniProt:K4CQ16	InterPro:NaCa_Exmemb	PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF1	EnsemblPlantsGene:Solyc09g005260.2
EnsemblPlants:Solyc09g005260.2.1	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846	TMHMM:TMhelix	UniParc:UPI000276AF23	SEG:seg

Description

No Description!

Coordinates

chr9:-:191528..195466

Molecular Weight (calculated)

49082.7 Da

IEP (calculated)

8.218

GRAVY (calculated)

0.644

Length

454 amino acids

Sequence
(BLAST)

001: MASSSPAAET WLLENGNIKP LSKEMRHGHG RSHGRTAHNV SSSSLRKKSD LTLVRKVPCA IVRDVLANIQ EVILGTKLFV LFIAIPIAII AHYKNFGRSW
101: VFGLSLLGLT PLAERVSFLT EQIAFFTGPT VGGLLNATCG NATELIIAIF ALIEHKVDVV KYSLLGSILS NLLLVLGTSL FCGGIANISK EQKYDRKQAD
201: VNSLLLLLGL LCHVLPLMFR YAGVGESAAI TAQATLNLSR VSCIVMLLAK FGYLVFQLWT HRQLFRRTKN EGDDIEDEEA VLSFWSAFAW LVGMTILIAL
301: LSEYVVGTIE AASNSWGISV SFISVILLPI VGNAAEHAGA IIFAFKNKLD ISLGVALGSA TQIAMFVVPL CVIVSWIIGV RMDLDFSLLE TGSLALAIIV
401: TAFTLQDGTS HYIKGLVLLL CYIVIGACFF VSNIPQKQPN GVNLGSSSEG IMRV

Best Arabidopsis Sequence Match ( AT3G51860.1 )
(BLAST)

001: MGSIVEPWAA IAENGNANVT AKGSSRELRH GRTAHNMSSS SLRKKSDLRL VQKVPCKTLK NILSNLQEVI LGTKLTLLFL AIPLAILANS YNYGRPLIFG
101: LSLIGLTPLA ERVSFLTEQL AFYTGPTVGG LLNATCGNAT ELIIAILALA NNKVAVVKYS LLGSILSNLL LVLGTSLFFG GIANIRREQR FDRKQADVNF
201: FLLLMGLLCH LLPLLLKYAA TGEVSTSMIN KMSLTLSRTS SIVMLIAYIA YLIFQLWTHR QLFEAQQDDD DAYDDEVSVE ETPVIGFWSG FAWLVGMTIV
301: IALLSEYVVD TIEDASDSWG LSVSFISIIL LPIVGNAAEH AGAIIFAFKN KLDISLGVAL GSATQISLFV VPLSVIVAWI LGIKMDLNFN ILETSSLALA
401: IIITAFTLQD GTSHYMKGLV LLLCYVIIAA CFFVDQIPQP NDLDVGLQPM NNLGEVFSA

Arabidopsis Description

CAX3Cation exchanger 3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.