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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • vacuole 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400079826 Potato cytosol, peroxisome, plasma membrane 94.47 97.71
Solyc12g011070.1.1 Tomato plasma membrane 59.73 78.95
Solyc03g123790.2.1 Tomato plasma membrane 62.83 74.15
GSMUA_Achr5P05070_001 Banana cytosol, peroxisome, plasma membrane 67.92 67.92
Solyc12g011080.1.1 Tomato cytosol 12.61 67.06
Solyc12g055750.1.1 Tomato endoplasmic reticulum, peroxisome, plasma membrane 63.94 66.59
Os02t0138900-01 Rice golgi, plasma membrane 36.95 66.53
EES06255 Sorghum golgi, peroxisome, plasma membrane 57.96 61.07
TraesCS6B01G137200.1 Wheat mitochondrion 60.62 59.83
GSMUA_Achr3P05320_001 Banana cytosol, peroxisome, plasma membrane 60.62 59.7
TraesCS6D01G096900.1 Wheat mitochondrion 59.96 59.17
TraesCS6A01G108700.1 Wheat endoplasmic reticulum, golgi, mitochondrion, peroxisome 60.4 55.94
Solyc06g006110.2.1 Tomato cytosol, peroxisome, plasma membrane 44.03 47.04
Solyc09g005260.2.1 Tomato plastid 43.14 42.95
Zm00001d015225_P001 Maize cytosol, endoplasmic reticulum, plasma membrane 45.8 42.86
VIT_12s0057g01500.t01 Wine grape cytosol, endoplasmic reticulum, plasma membrane 70.35 28.83
Protein Annotations
Gene3D:1.20.1420.30Gene3D:1.20.58.1130MapMan:24.2.9.1.1InterPro:CAXInterPro:CaH_exchangGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773
GO:GO:0006810GO:GO:0006812GO:GO:0006816GO:GO:0008150GO:GO:0008324GO:GO:0009705
GO:GO:0015369GO:GO:0016020GO:GO:0016021GO:GO:0055085GO:GO:0070588GO:GO:0098655
UniProt:K4CGE4InterPro:NaCa_ExmembPFAM:PF01699PANTHER:PTHR31503PANTHER:PTHR31503:SF34EnsemblPlantsGene:Solyc07g056110.2
EnsemblPlants:Solyc07g056110.2.1TIGRFAMs:TIGR00378TIGRFAMs:TIGR00846TMHMM:TMhelixUniParc:UPI000276AE6ASEG:seg
Description
No Description!
Coordinates
chr7:-:63974745..63980566
Molecular Weight (calculated)
49453.6 Da
IEP (calculated)
4.806
GRAVY (calculated)
0.480
Length
452 amino acids
Sequence
(BLAST)
001: MARDSQFSGG KSHLEMGSLE GRAVLQLEDE TLADSKHNDR RTSSMDAAPQ ISVFDTDTDD VSCKCTWKSI LRQIHIVLFS KKLNLLIPCG PLAMLVDMLT
101: DHHGWIFFLS LLGIIPLAER LGWATEQLAF YTGPTVGGLL NATFGNATEL IISMYALRRG MIRVVQQSLL GSILSNTLLV LGCAFFAGGI AHSTKDQLFD
201: KGNAVMNSGL LLMAVMGLLF PAVLHFTHTE LHFGKSELAL SRFSSCVMLV AYGAYLFYQL TSQNSFYMPL AEEEGENDES LEEEEAPEIS KWGSIIWLSI
301: LTLWIAVLSE YLVNAIEGAS VAMSIPVAFI SVILLPIVGN AAEHAGAVMF AVKDKLDISL GVAIGSSTQI AMFGIPFCVV VGWIMGRPMD LNFQLFETAT
401: LFMSVLVVAF MLQDGTSNYF KGLMLLLCYL IVAASFFVHI DPEAIQDKPK KT
Best Arabidopsis Sequence Match ( AT1G55730.2 )
(BLAST)
001: MGCCKVPALI QAQVEMGLVN DVEHKSLFRR DTDSPERKAA SLMEQGSLSA SFRECSTKTP NNSVLQSFKI VILSNKLNLL LPFGPLAILL HYLTDNKGWI
101: FLLSLVGITP LAERLGYATE QLACYTGSTV GGLLNATFGN VTELIISIFA LKSGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFSQKE QVFDKGNAVV
201: NSGLLLMAVM GLLFPAVLHY THSEVHAGSS ELALSRFSSC IMLVAYAAYL FFQLKSQPSS YTPLTEETNQ NEETSDDDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWKIP ISFISVILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG AQMDLNFQLF ETATLFITVI
401: VVAFFLQEGT SNYFKGLMLI LCYLIVAASF FVHEDPHQDD I
Arabidopsis Description
CAX5Vacuolar cation/proton exchanger 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L783]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.