Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- vacuole 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g056110.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 67.06 | 12.61 |
| Solyc12g055750.1.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane | 37.65 | 7.37 |
| Solyc03g123790.2.1 | Tomato | plasma membrane | 31.76 | 7.05 |
| Solyc06g006110.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 28.24 | 5.67 |
| Solyc09g005260.2.1 | Tomato | plastid | 24.71 | 4.63 |
| Solyc12g011070.1.1 | Tomato | plasma membrane | 2.35 | 0.58 |
Protein Annotations
| EnsemblPlants:Solyc12g011080.1.1 | EnsemblPlantsGene:Solyc12g011080.1 | PANTHER:PTHR31503 | PANTHER:PTHR31503:SF34 | UniParc:UPI000276A185 | UniProt:K4DCJ4 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr12:-:3937676..3938101
Molecular Weight (calculated)
9472.4 Da
IEP (calculated)
4.384
GRAVY (calculated)
0.047
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: MGSSDERAVL QLEDENLVRL EHFDRKASSL GTVPQRSSYD LELNILVPCG PLAILVDELT DQHGWTFILS LLGIIPLAER LGWAK
001: MYMELYLMFS NFFKSIRWCK VPAFMQAKVE MGLVNEVELK SLLEQETDSP QTNAASLMEQ GSLRERRAKA PRNSVVQSFK IVILSNKLNL LLPFGPLAIL
101: VHYLTDNKGW FFLLSLVGIT PLAERLGYAT EQLSCYTGAT VGGLLNATFG NVIELIISII ALKNGMIRVV QLTLLGSILS NILLVLGCAF FCGGLVFPGK
201: DQVFDKRNAV VSSGMLLMAV MGLLFPTFLH YTHSEVHAGS SELALSRFIS CIMLVAYAAY LFFQLKSQPS FYTEKTNQNE ETSNDDEDPE ISKWEAIIWL
301: SIFTAWVSLL SGYLVDAIEG TSVSWKIPIS FISVILLPIV GNAAEHAGAI MFAMKDKLDL SLGVAIGSSI QISMFAVPFC VVIGWMMGAQ MDLNLQLFET
401: ATLLITVIVV AFFLQLEGTS NYFKRLMLIL CYLIVAASFF VHEDPHQGTD HQQICTCRTP SYTYEIL
101: VHYLTDNKGW FFLLSLVGIT PLAERLGYAT EQLSCYTGAT VGGLLNATFG NVIELIISII ALKNGMIRVV QLTLLGSILS NILLVLGCAF FCGGLVFPGK
201: DQVFDKRNAV VSSGMLLMAV MGLLFPTFLH YTHSEVHAGS SELALSRFIS CIMLVAYAAY LFFQLKSQPS FYTEKTNQNE ETSNDDEDPE ISKWEAIIWL
301: SIFTAWVSLL SGYLVDAIEG TSVSWKIPIS FISVILLPIV GNAAEHAGAI MFAMKDKLDL SLGVAIGSSI QISMFAVPFC VVIGWMMGAQ MDLNLQLFET
401: ATLLITVIVV AFFLQLEGTS NYFKRLMLIL CYLIVAASFF VHEDPHQGTD HQQICTCRTP SYTYEIL
Arabidopsis Description
ATCAX6cation exchanger 6 [Source:TAIR;Acc:AT1G55720]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.