Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400023736 | Potato | golgi, peroxisome, plasma membrane | 97.65 | 86.18 |
| Solyc12g055750.1.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane | 91.38 | 80.65 |
| GSMUA_Achr11P... | Banana | golgi, peroxisome, plasma membrane | 83.55 | 75.12 |
| GSMUA_Achr3P05680_001 | Banana | plasma membrane | 76.5 | 73.25 |
| TraesCS4A01G156500.1 | Wheat | cytosol, peroxisome, plasma membrane | 80.68 | 71.53 |
| KRH23701 | Soybean | golgi, peroxisome, plasma membrane | 81.2 | 71.17 |
| TraesCS4D01G156900.2 | Wheat | cytosol, peroxisome, plasma membrane | 80.42 | 71.13 |
| VIT_09s0018g01840.t01 | Wine grape | plasma membrane | 84.07 | 71.08 |
| TraesCS4B01G161500.2 | Wheat | cytosol, peroxisome, plasma membrane | 80.16 | 71.06 |
| KRH09614 | Soybean | golgi, peroxisome, plasma membrane | 80.16 | 70.74 |
| Os04t0653200-01 | Rice | golgi, peroxisome, plasma membrane | 76.76 | 70.5 |
| Os03t0397400-01 | Rice | golgi, peroxisome, plasma membrane | 80.16 | 70.25 |
| Zm00001d047242_P001 | Maize | golgi, peroxisome, plasma membrane | 79.9 | 70.18 |
| KXG27283 | Sorghum | plastid | 75.72 | 70.05 |
| Zm00001d029432_P002 | Maize | golgi, peroxisome, plasma membrane | 79.63 | 69.95 |
| TraesCS2B01G534600.1 | Wheat | golgi, peroxisome, plastid, vacuole | 76.24 | 69.69 |
| TraesCS2D01G507000.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 76.24 | 69.69 |
| TraesCS2A01G506200.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 75.98 | 69.45 |
| Zm00001d002022_P010 | Maize | plastid | 75.46 | 68.97 |
| HORVU4Hr1G037210.1 | Barley | vacuole | 80.42 | 68.6 |
| EER94732 | Sorghum | cytosol, peroxisome, plasma membrane | 79.37 | 68.31 |
| Zm00001d026479_P006 | Maize | plastid | 76.5 | 68.3 |
| Solyc12g011070.1.1 | Tomato | plasma membrane | 59.79 | 66.96 |
| HORVU2Hr1G112420.3 | Barley | cytosol | 76.5 | 66.14 |
| Solyc07g056110.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 74.15 | 62.83 |
| Solyc06g006110.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 50.91 | 46.1 |
| Solyc09g005260.2.1 | Tomato | plastid | 49.35 | 41.63 |
| VIT_14s0083g00390.t01 | Wine grape | cytosol | 15.93 | 38.36 |
| Solyc12g011080.1.1 | Tomato | cytosol | 7.05 | 31.76 |
Protein Annotations
| Gene3D:1.20.1420.30 | Gene3D:1.20.58.1130 | MapMan:24.2.9.1.1 | InterPro:CAX | InterPro:CaH_exchang | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0006810 | GO:GO:0006812 | GO:GO:0006816 | GO:GO:0008150 | GO:GO:0008324 | GO:GO:0009705 |
| GO:GO:0015369 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | GO:GO:0070588 | GO:GO:0098655 |
| UniProt:K4BN77 | InterPro:NaCa_Exmemb | PFAM:PF01699 | PANTHER:PTHR31503 | PANTHER:PTHR31503:SF34 | EnsemblPlantsGene:Solyc03g123790.2 |
| EnsemblPlants:Solyc03g123790.2.1 | TIGRFAMs:TIGR00378 | TIGRFAMs:TIGR00846 | TMHMM:TMhelix | UniParc:UPI0002765DF1 | SEG:seg |
Description
No Description!
Coordinates
chr3:-:70517564..70522756
Molecular Weight (calculated)
42098.1 Da
IEP (calculated)
5.074
GRAVY (calculated)
0.702
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQISLLRSI YIVIIKAKIN LLLPFGPLAI LLHYLTGKHT WVFFFSLLGI TPLAERLGYA TEQLAFYTGP TVGGLLNATF GNATEMIISL YALNNGMMRV
101: VKQSLLGSIL SNMLLVLGCA FFSGGIIHQQ KVQVFNKATA IVNSGLLLMA VMGLLFPAVL HFTHTELHFG KSQLALSRFS SCIMLVAYAS YLFFQLKSQP
201: NLYSSMSEDE EHNSADPEEE EAPEITQWEA IGWLAVLTIW ISVLSGYLVD AIEGASDSLN MPMSFISVIL LPIVGNAAEH ASAIMFAMKD KLDITLGVAI
301: GSSTQISMFV IPFCVVVGWF MGKPMDLNFQ LFETATLFIT VLVVAFMLQE GTSNYFKGLM LILCYLIVAA SFFVHVDPSN DAE
101: VKQSLLGSIL SNMLLVLGCA FFSGGIIHQQ KVQVFNKATA IVNSGLLLMA VMGLLFPAVL HFTHTELHFG KSQLALSRFS SCIMLVAYAS YLFFQLKSQP
201: NLYSSMSEDE EHNSADPEEE EAPEITQWEA IGWLAVLTIW ISVLSGYLVD AIEGASDSLN MPMSFISVIL LPIVGNAAEH ASAIMFAMKD KLDITLGVAI
301: GSSTQISMFV IPFCVVVGWF MGKPMDLNFQ LFETATLFIT VLVVAFMLQE GTSNYFKGLM LILCYLIVAA SFFVHVDPSN DAE
001: MGCCKVPALI QAQVEMGLVN DVEHKSLFRR DTDSPERKAA SLMEQGSLSA SFRECSTKTP NNSVLQSFKI VILSNKLNLL LPFGPLAILL HYLTDNKGWI
101: FLLSLVGITP LAERLGYATE QLACYTGSTV GGLLNATFGN VTELIISIFA LKSGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFSQKE QVFDKGNAVV
201: NSGLLLMAVM GLLFPAVLHY THSEVHAGSS ELALSRFSSC IMLVAYAAYL FFQLKSQPSS YTPLTEETNQ NEETSDDDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWKIP ISFISVILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG AQMDLNFQLF ETATLFITVI
401: VVAFFLQEGT SNYFKGLMLI LCYLIVAASF FVHEDPHQDD I
101: FLLSLVGITP LAERLGYATE QLACYTGSTV GGLLNATFGN VTELIISIFA LKSGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFSQKE QVFDKGNAVV
201: NSGLLLMAVM GLLFPAVLHY THSEVHAGSS ELALSRFSSC IMLVAYAAYL FFQLKSQPSS YTPLTEETNQ NEETSDDDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWKIP ISFISVILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG AQMDLNFQLF ETATLFITVI
401: VVAFFLQEGT SNYFKGLMLI LCYLIVAASF FVHEDPHQDD I
Arabidopsis Description
CAX5Vacuolar cation/proton exchanger 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L783]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.