Factsheet for TraesCS4B01G161500.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G156900.2	Wheat	cytosol, peroxisome, plasma membrane	99.07	98.85
TraesCS4A01G156500.1	Wheat	cytosol, peroxisome, plasma membrane	98.84	98.84
HORVU4Hr1G037210.1	Barley	vacuole	96.99	93.32
Os03t0397400-01	Rice	golgi, peroxisome, plasma membrane	88.89	87.87
Zm00001d047242_P001	Maize	golgi, peroxisome, plasma membrane	87.04	86.24
Zm00001d029432_P002	Maize	golgi, peroxisome, plasma membrane	87.04	86.24
EER94732	Sorghum	cytosol, peroxisome, plasma membrane	88.19	85.62
Solyc03g123790.2.1	Tomato	plasma membrane	71.06	80.16
GSMUA_Achr3P05680_001	Banana	plasma membrane	70.14	75.75
PGSC0003DMT400023736	Potato	golgi, peroxisome, plasma membrane	73.61	73.27
Solyc12g055750.1.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	72.92	72.58
TraesCS2B01G534600.1	Wheat	golgi, peroxisome, plastid, vacuole	70.14	72.31
KRH23701	Soybean	golgi, peroxisome, plasma membrane	73.15	72.31
KRH09614	Soybean	golgi, peroxisome, plasma membrane	72.45	72.12
VIT_09s0018g01840.t01	Wine grape	plasma membrane	75.0	71.52
TraesCS6B01G137200.1	Wheat	mitochondrion	58.8	55.46
TraesCS2B01G465600.1	Wheat	plastid	44.91	42.17
VIT_14s0083g00390.t01	Wine grape	cytosol	15.51	42.14

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	InterPro:CAX	InterPro:CaH_exchang	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150
GO:GO:0008324	GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:NaCa_Exmemb
PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF34	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS4B01G161500	EnsemblPlants:TraesCS4B01G161500.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4B:+:317758282..317765887

Molecular Weight (calculated)

47215.9 Da

IEP (calculated)

4.786

GRAVY (calculated)

0.494

Length

432 amino acids

Sequence
(BLAST)

001: MMGAADKAEL GFEEEDDMAA DTPPPARKMQ SLDFEHIGSL AAVAESLSPR SKWRMALRSI RIVIFQAKIN VLLPFGPLAI TLHYLSGNHQ GWVFLFSLVG
101: ITPLAERLGY ATEQLACYTG PTIGGLLNAT FGNATEMIIS IYALKNGMIR VVQQSLLGSI LSNMLLVLGC AFFAGGLAHP NRDQVFNKAS AVVNSGLLLM
201: AVLGLMFPAV LHFTHSEAHY GKSEVSLSRF SSCIMLVAYA SYLFFQLKSQ RSLYSPIGEE EESTEDEEDE KEIAQGEAIS WLFVLTIWIS ILSGYLVDAI
301: QGASESLKMP LAFISVILLP IVGNAAEHAS AIMFAMKNKL DITLGVAIGS STQISMFVIP FCVVIGWMMG EEMDLNFQLF ETATLFITVL VVAFMLQEGT
401: SNYFKGFMLI LCYLIVAASF FVHVDPKSSD NK

Best Arabidopsis Sequence Match ( AT1G55730.2 )
(BLAST)

001: MGCCKVPALI QAQVEMGLVN DVEHKSLFRR DTDSPERKAA SLMEQGSLSA SFRECSTKTP NNSVLQSFKI VILSNKLNLL LPFGPLAILL HYLTDNKGWI
101: FLLSLVGITP LAERLGYATE QLACYTGSTV GGLLNATFGN VTELIISIFA LKSGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFSQKE QVFDKGNAVV
201: NSGLLLMAVM GLLFPAVLHY THSEVHAGSS ELALSRFSSC IMLVAYAAYL FFQLKSQPSS YTPLTEETNQ NEETSDDDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWKIP ISFISVILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG AQMDLNFQLF ETATLFITVI
401: VVAFFLQEGT SNYFKGLMLI LCYLIVAASF FVHEDPHQDD I

Arabidopsis Description

CAX5Vacuolar cation/proton exchanger 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L783]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.