Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plastid, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G507000.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 98.81 | 98.81 |
| TraesCS2A01G506200.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 98.33 | 98.33 |
| HORVU2Hr1G112420.3 | Barley | cytosol | 97.85 | 92.55 |
| Os04t0653200-01 | Rice | golgi, peroxisome, plasma membrane | 86.63 | 87.05 |
| KXG27283 | Sorghum | plastid | 83.77 | 84.78 |
| Zm00001d002022_P010 | Maize | plastid | 84.73 | 84.73 |
| Zm00001d026479_P006 | Maize | plastid | 84.01 | 82.05 |
| Solyc03g123790.2.1 | Tomato | plasma membrane | 69.69 | 76.24 |
| GSMUA_Achr3P05680_001 | Banana | plasma membrane | 71.6 | 75.0 |
| TraesCS4B01G161500.2 | Wheat | cytosol, peroxisome, plasma membrane | 72.31 | 70.14 |
| PGSC0003DMT400023736 | Potato | golgi, peroxisome, plasma membrane | 70.17 | 67.74 |
| Solyc12g055750.1.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane | 69.45 | 67.05 |
| KRH23701 | Soybean | golgi, peroxisome, plasma membrane | 68.74 | 65.9 |
| KRH09614 | Soybean | golgi, peroxisome, plasma membrane | 67.78 | 65.44 |
| VIT_09s0018g01840.t01 | Wine grape | plasma membrane | 68.97 | 63.8 |
| TraesCS6B01G137200.1 | Wheat | mitochondrion | 60.62 | 55.46 |
| TraesCS2B01G465600.1 | Wheat | plastid | 43.91 | 40.0 |
| VIT_14s0083g00390.t01 | Wine grape | cytosol | 11.22 | 29.56 |
Protein Annotations
| Gene3D:1.20.1420.30 | Gene3D:1.20.58.1130 | MapMan:24.2.9.1.1 | InterPro:CAX | InterPro:CaH_exchang | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0006816 | GO:GO:0008150 |
| GO:GO:0008324 | GO:GO:0015369 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:NaCa_Exmemb |
| PFAM:PF01699 | PANTHER:PTHR31503 | PANTHER:PTHR31503:SF11 | TIGRFAMs:TIGR00378 | TIGRFAMs:TIGR00846 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS2B01G534600 | EnsemblPlants:TraesCS2B01G534600.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2B:-:730849111..730852087
Molecular Weight (calculated)
45767.5 Da
IEP (calculated)
4.598
GRAVY (calculated)
0.657
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MMENHQIEMG ALKANVLDLP NGVLRSSMIP SWSLHTTVKR VLQSIRTVIF TSKLNLLMPF GPATIVLYYT TNWHGVIFLF SMLGITPLAE RLGYATEQLA
101: VYTGPTLGGL LNATFGNATE MIIAIYALKN GMIRVVQQSL LGSILSNMLL VVGCAFFAGG IIHRNKDQVF SKATAVVNSG LLLMAVMGLM FPAVLHFTKS
201: EIQQGASELA LSRFSSCIML VAYASYLYFQ LSARNSSYSQ IGSEEVPNED ATEEDEEVEI SMWEAIVWLA VLTIWISVLS EYLVNAIEGA SDSLNLPVAF
301: ISVILLPIVG NAAEHASAIM FAMKDKLDIT IGVAIGSSTQ ISMFVIPFCV VVGWMMGQKM DLNFQLFETA TLFITVLVVA FMLQDGIANY LKGLMLVLCY
401: LIVAASFFVH VDPQASDDD
101: VYTGPTLGGL LNATFGNATE MIIAIYALKN GMIRVVQQSL LGSILSNMLL VVGCAFFAGG IIHRNKDQVF SKATAVVNSG LLLMAVMGLM FPAVLHFTKS
201: EIQQGASELA LSRFSSCIML VAYASYLYFQ LSARNSSYSQ IGSEEVPNED ATEEDEEVEI SMWEAIVWLA VLTIWISVLS EYLVNAIEGA SDSLNLPVAF
301: ISVILLPIVG NAAEHASAIM FAMKDKLDIT IGVAIGSSTQ ISMFVIPFCV VVGWMMGQKM DLNFQLFETA TLFITVLVVA FMLQDGIANY LKGLMLVLCY
401: LIVAASFFVH VDPQASDDD
001: MSCCKVPVLI EAQVEMVSAN ELENKSLFRQ EEDATQTKEA SLMEQGSLST SFPQHTPKAP KNSVLNSIKI VIFCNKLNLL LPFGPLAILV HYMIDSKGWV
101: FLLTLVGITP LAERLGYATE QLACYTGPTV GGLLNATFGN VTELIISIFA LKNGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFYQKD QVFDKGIATV
201: NSGLLLMAVM GILFPAVLHY THSEVHAGSS ELALSRFSSC IMLIAYAAYL FFQLKSQSNS YSPLDEESNQ NEETSAEDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWNIP IAFISTILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG QQMDLNFQLF ETAMLFITVI
401: VVAFFLQEGS SNYFKGLMLI LCYLIVAASF FVHEDPHQDG I
101: FLLTLVGITP LAERLGYATE QLACYTGPTV GGLLNATFGN VTELIISIFA LKNGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFYQKD QVFDKGIATV
201: NSGLLLMAVM GILFPAVLHY THSEVHAGSS ELALSRFSSC IMLIAYAAYL FFQLKSQSNS YSPLDEESNQ NEETSAEDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWNIP IAFISTILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG QQMDLNFQLF ETAMLFITVI
401: VVAFFLQEGS SNYFKGLMLI LCYLIVAASF FVHEDPHQDG I
Arabidopsis Description
CAX2Vacuolar cation/proton exchanger 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39254]
SUBAcon: [peroxisome,golgi,vacuole]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.