Factsheet for HORVU2Hr1G112420.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G507000.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	92.78	98.09
TraesCS2B01G534600.1	Wheat	golgi, peroxisome, plastid, vacuole	92.55	97.85
TraesCS2A01G506200.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	92.33	97.61
Os04t0653200-01	Rice	golgi, peroxisome, plasma membrane	82.62	87.77
KXG27283	Sorghum	plastid	79.46	85.02
Zm00001d002022_P010	Maize	plastid	80.36	84.96
Zm00001d026479_P006	Maize	plastid	79.68	82.28
Solyc03g123790.2.1	Tomato	plasma membrane	66.14	76.5
GSMUA_Achr3P05680_001	Banana	plasma membrane	68.17	75.5
PGSC0003DMT400023736	Potato	golgi, peroxisome, plasma membrane	66.37	67.74
HORVU4Hr1G037210.1	Barley	vacuole	68.4	67.48
Solyc12g055750.1.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	65.91	67.28
KRH23701	Soybean	golgi, peroxisome, plasma membrane	65.24	66.13
KRH09614	Soybean	golgi, peroxisome, plasma membrane	64.33	65.67
VIT_09s0018g01840.t01	Wine grape	plasma membrane	65.46	64.02
HORVU2Hr1G102840.16	Barley	endoplasmic reticulum, plasma membrane	41.08	40.0
HORVU3Hr1G049060.8	Barley	endoplasmic reticulum, peroxisome, plasma membrane, plastid	39.73	37.13
VIT_14s0083g00390.t01	Wine grape	cytosol	10.61	29.56

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	UniProt:A0A287JGH6	InterPro:CAX	InterPro:CaH_exchang
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816
GO:GO:0008150	GO:GO:0008324	GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
GO:GO:0070588	GO:GO:0098655	EnsemblPlantsGene:HORVU2Hr1G112420	EnsemblPlants:HORVU2Hr1G112420.3	InterPro:NaCa_Exmemb	PFAM:PF01699
PANTHER:PTHR31503	PANTHER:PTHR31503:SF11	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846	TMHMM:TMhelix	UniParc:UPI000B4874C4
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:725773699..725777966

Molecular Weight (calculated)

47854.7 Da

IEP (calculated)

4.440

GRAVY (calculated)

0.560

Length

443 amino acids

Sequence
(BLAST)

001: XXSPEGYPPP AADPPDSPPP VVAQMMENHQ IEMGALKANG LDVPNGVLRS SMIPSWNLHT IVKRVLQSIR TVIFTSKLNL LMPFGPATIV LYYTTNWHGV
101: IFLFSMLGIT PLAERLGYAT EQLAVYTGPT LGGLLNATFG NATEMIIAIY ALKNGMIRVV QQSLLGSILS NMLLVVGCAF FAGGIIHRNK DQVFSKATAV
201: VNSGLLLMAV MGLMFPAVLH FTHSEIQQGA SELALSRFSS GIMLVAYASY LYFQLSSRNS SYSQIGSEEV PNEDATEEDE EVEISMWEAI AWLAVLTIWI
301: SVLSEYLVNA IEGASDSLNL PVAFISVILL PIVGNAAEHA SAIMFAMKDK LDITIGVAIG SSTQISMFVI PFCVVVGWMM GQKMDLNFQL FETATLFITV
401: LVVAFMLQDG VANYLKGLML VLCYLIVAAS FFVHVDPQAS DDD

Best Arabidopsis Sequence Match ( AT1G55730.2 )
(BLAST)

001: MGCCKVPALI QAQVEMGLVN DVEHKSLFRR DTDSPERKAA SLMEQGSLSA SFRECSTKTP NNSVLQSFKI VILSNKLNLL LPFGPLAILL HYLTDNKGWI
101: FLLSLVGITP LAERLGYATE QLACYTGSTV GGLLNATFGN VTELIISIFA LKSGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFSQKE QVFDKGNAVV
201: NSGLLLMAVM GLLFPAVLHY THSEVHAGSS ELALSRFSSC IMLVAYAAYL FFQLKSQPSS YTPLTEETNQ NEETSDDDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWKIP ISFISVILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG AQMDLNFQLF ETATLFITVI
401: VVAFFLQEGT SNYFKGLMLI LCYLIVAASF FVHEDPHQDD I

Arabidopsis Description

CAX5Vacuolar cation/proton exchanger 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L783]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.