Factsheet for TraesCS2A01G506200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

plastid 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane, plastid
Any Predictor:	cytosol, peroxisome, plasma membrane, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G507000.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	98.57	98.57
TraesCS2B01G534600.1	Wheat	golgi, peroxisome, plastid, vacuole	98.33	98.33
HORVU2Hr1G112420.3	Barley	cytosol	97.61	92.33
Os04t0653200-01	Rice	golgi, peroxisome, plasma membrane	86.63	87.05
KXG27283	Sorghum	plastid	84.25	85.27
Zm00001d002022_P010	Maize	plastid	85.2	85.2
Zm00001d026479_P006	Maize	plastid	84.49	82.52
Solyc03g123790.2.1	Tomato	plasma membrane	69.45	75.98
GSMUA_Achr3P05680_001	Banana	plasma membrane	71.12	74.5
TraesCS4A01G156500.1	Wheat	cytosol, peroxisome, plasma membrane	72.31	70.14
PGSC0003DMT400023736	Potato	golgi, peroxisome, plasma membrane	69.69	67.28
Solyc12g055750.1.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	68.97	66.59
KRH23701	Soybean	golgi, peroxisome, plasma membrane	68.5	65.68
KRH09614	Soybean	golgi, peroxisome, plasma membrane	67.54	65.21
VIT_09s0018g01840.t01	Wine grape	plasma membrane	68.74	63.58
TraesCS6A01G108700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, peroxisome	60.38	51.84
TraesCS2A01G444600.1	Wheat	plasma membrane	43.68	42.07
TraesCS3A01G202800.1	Wheat	plastid	44.63	40.48
VIT_14s0083g00390.t01	Wine grape	cytosol	11.22	29.56

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	InterPro:CAX	InterPro:CaH_exchang	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150
GO:GO:0008324	GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:NaCa_Exmemb
PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF11	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS2A01G506200	EnsemblPlants:TraesCS2A01G506200.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:-:734149077..734152012

Molecular Weight (calculated)

45755.4 Da

IEP (calculated)

4.609

GRAVY (calculated)

0.639

Length

419 amino acids

Sequence
(BLAST)

001: MMENHQIEMG AFKANGLDVP NGVLRSTMIP SWSLHTTVKR VLQSIRTVIF TSKLNLLMPF GPATIVLYYT TDWHGVIFLF SMLGITPLAE RLGYATEQLA
101: VYTGPTLGGL LNATFGNATE MIIAIYALKN GMIRVVQQSL LGSILSNMLL VVGCAFFAGG IIHRNKDQVF SKATAVVNSG LLLMAVMGLM FPAVLHFTKS
201: EIQQGASELA LSRFSSCIML VAYASYLYFQ LSARNSSYSQ IGSEEVPNED ATEEDEEVEI SMWEAIAWLA VLTIWISVLS EYLVNAIEGA SDSLHLPVAF
301: ISVILLPIVG NAAEHASAIM FAMKDKLDIT IGVAIGSSTQ ISMFVIPFCV VVGWMMGQKM DLNFQLFETA TLFITVLVVA FMLQDGIANY LKGLMLVLCY
401: LIVAASFFVH VDPQASDDD

Best Arabidopsis Sequence Match ( AT3G13320.1 )
(BLAST)

001: MSCCKVPVLI EAQVEMVSAN ELENKSLFRQ EEDATQTKEA SLMEQGSLST SFPQHTPKAP KNSVLNSIKI VIFCNKLNLL LPFGPLAILV HYMIDSKGWV
101: FLLTLVGITP LAERLGYATE QLACYTGPTV GGLLNATFGN VTELIISIFA LKNGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFYQKD QVFDKGIATV
201: NSGLLLMAVM GILFPAVLHY THSEVHAGSS ELALSRFSSC IMLIAYAAYL FFQLKSQSNS YSPLDEESNQ NEETSAEDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWNIP IAFISTILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG QQMDLNFQLF ETAMLFITVI
401: VVAFFLQEGS SNYFKGLMLI LCYLIVAASF FVHEDPHQDG I

Arabidopsis Description

CAX2Vacuolar cation/proton exchanger 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39254]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.