Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plasma membrane 2
- plastid 1
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0018g01840.t01 | Wine grape | plasma membrane | 61.64 | 21.63 |
| KRH23701 | Soybean | golgi, peroxisome, plasma membrane | 46.54 | 16.93 |
| GSMUA_Achr11P... | Banana | golgi, peroxisome, plasma membrane | 44.65 | 16.67 |
| Solyc03g123790.2.1 | Tomato | plasma membrane | 38.36 | 15.93 |
| KRH09614 | Soybean | golgi, peroxisome, plasma membrane | 43.4 | 15.9 |
| PGSC0003DMT400023736 | Potato | golgi, peroxisome, plasma membrane | 43.4 | 15.9 |
| TraesCS4B01G161500.2 | Wheat | cytosol, peroxisome, plasma membrane | 42.14 | 15.51 |
| TraesCS4D01G156900.2 | Wheat | cytosol, peroxisome, plasma membrane | 42.14 | 15.47 |
| Solyc12g055750.1.1 | Tomato | endoplasmic reticulum, peroxisome, plasma membrane | 42.14 | 15.44 |
| TraesCS4A01G156500.1 | Wheat | cytosol, peroxisome, plasma membrane | 41.51 | 15.28 |
| HORVU4Hr1G037210.1 | Barley | vacuole | 42.14 | 14.92 |
| Zm00001d047242_P001 | Maize | golgi, peroxisome, plasma membrane | 40.88 | 14.91 |
| Zm00001d029432_P002 | Maize | golgi, peroxisome, plasma membrane | 40.88 | 14.91 |
| EER94732 | Sorghum | cytosol, peroxisome, plasma membrane | 41.51 | 14.83 |
| Os03t0397400-01 | Rice | golgi, peroxisome, plasma membrane | 39.62 | 14.42 |
| GSMUA_Achr3P05680_001 | Banana | plasma membrane | 32.7 | 13.0 |
| Os04t0653200-01 | Rice | golgi, peroxisome, plasma membrane | 32.7 | 12.47 |
| VIT_19s0015g01320.t01 | Wine grape | cytosol, peroxisome, vacuole | 33.96 | 12.11 |
| KXG27283 | Sorghum | plastid | 30.82 | 11.84 |
| Zm00001d026479_P006 | Maize | plastid | 31.45 | 11.65 |
| Zm00001d002022_P010 | Maize | plastid | 30.19 | 11.46 |
| TraesCS2A01G506200.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 29.56 | 11.22 |
| TraesCS2B01G534600.1 | Wheat | golgi, peroxisome, plastid, vacuole | 29.56 | 11.22 |
| TraesCS2D01G507000.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 29.56 | 11.22 |
| HORVU2Hr1G112420.3 | Barley | cytosol | 29.56 | 10.61 |
| VIT_08s0007g02240.t01 | Wine grape | golgi, peroxisome, plasma membrane | 28.3 | 10.04 |
| VIT_06s0004g06570.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 25.79 | 9.19 |
| VIT_12s0057g01500.t01 | Wine grape | cytosol, endoplasmic reticulum, plasma membrane | 33.96 | 4.9 |
Protein Annotations
| EntrezGene:100852538 | wikigene:100852538 | EntrezGene:100852606 | wikigene:100852606 | MapMan:35.1 | ProteinID:CCB44055 |
| ProteinID:CCB44055.1 | UniProt:F6GVS0 | EMBL:FN594955 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0009705 | GO:GO:0016020 | GO:GO:0016021 | EntrezGene:LOC100852538 |
| wikigene:LOC100852538 | EntrezGene:LOC100852606 | wikigene:LOC100852606 | PANTHER:PTHR31503 | PANTHER:PTHR31503:SF35 | TMHMM:TMhelix |
| UniParc:UPI0002108955 | ArrayExpress:VIT_14s0083g00390 | EnsemblPlantsGene:VIT_14s0083g00390 | EnsemblPlants:VIT_14s0083g00390.t01 | RefSeq:XP_003633754 | RefSeq:XP_003633754.1 |
| RefSeq:XP_003633756 | RefSeq:XP_003633756.1 | : | : | : | : |
Description
No Description!
Coordinates
chr14:-:22431591..22456772
Molecular Weight (calculated)
17759.5 Da
IEP (calculated)
8.810
GRAVY (calculated)
-0.001
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSIEEKIDL ESDAEIPYST SQGTRKMGSI EEKIDLESDA EIPYSTSQGT RKVHSFDFET SHIGSHAALS TSWIFKKMRT APLRSVYIVL IKAKINMLLP
101: FGPLAILLHY LTGKHGWVFF FSLLGITPLA ERLGFATEQL AFYTGATARG YIILLKQKN
101: FGPLAILLHY LTGKHGWVFF FSLLGITPLA ERLGFATEQL AFYTGATARG YIILLKQKN
001: MGCCKVPALI QAQVEMGLVN DVEHKSLFRR DTDSPERKAA SLMEQGSLSA SFRECSTKTP NNSVLQSFKI VILSNKLNLL LPFGPLAILL HYLTDNKGWI
101: FLLSLVGITP LAERLGYATE QLACYTGSTV GGLLNATFGN VTELIISIFA LKSGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFSQKE QVFDKGNAVV
201: NSGLLLMAVM GLLFPAVLHY THSEVHAGSS ELALSRFSSC IMLVAYAAYL FFQLKSQPSS YTPLTEETNQ NEETSDDDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWKIP ISFISVILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG AQMDLNFQLF ETATLFITVI
401: VVAFFLQEGT SNYFKGLMLI LCYLIVAASF FVHEDPHQDD I
101: FLLSLVGITP LAERLGYATE QLACYTGSTV GGLLNATFGN VTELIISIFA LKSGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFSQKE QVFDKGNAVV
201: NSGLLLMAVM GLLFPAVLHY THSEVHAGSS ELALSRFSSC IMLVAYAAYL FFQLKSQPSS YTPLTEETNQ NEETSDDDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWKIP ISFISVILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG AQMDLNFQLF ETATLFITVI
401: VVAFFLQEGT SNYFKGLMLI LCYLIVAASF FVHEDPHQDD I
Arabidopsis Description
CAX5Vacuolar cation/proton exchanger 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L783]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.