Factsheet for VIT_09s0018g01840.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g123790.2.1	Tomato	plasma membrane	71.08	84.07
PGSC0003DMT400023736	Potato	golgi, peroxisome, plasma membrane	77.48	80.88
Solyc12g055750.1.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	76.6	79.95
GSMUA_Achr11P...	Banana	golgi, peroxisome, plasma membrane	75.06	79.81
KRH23701	Soybean	golgi, peroxisome, plasma membrane	74.39	77.12
KRH09614	Soybean	golgi, peroxisome, plasma membrane	72.85	76.04
TraesCS4A01G156500.1	Wheat	cytosol, peroxisome, plasma membrane	71.96	75.46
TraesCS4D01G156900.2	Wheat	cytosol, peroxisome, plasma membrane	71.74	75.06
TraesCS4B01G161500.2	Wheat	cytosol, peroxisome, plasma membrane	71.52	75.0
GSMUA_Achr3P05680_001	Banana	plasma membrane	66.0	74.75
Zm00001d047242_P001	Maize	golgi, peroxisome, plasma membrane	71.74	74.54
Os03t0397400-01	Rice	golgi, peroxisome, plasma membrane	71.3	73.91
Zm00001d029432_P002	Maize	golgi, peroxisome, plasma membrane	70.86	73.62
EER94732	Sorghum	cytosol, peroxisome, plasma membrane	71.74	73.03
HORVU4Hr1G037210.1	Barley	vacuole	71.52	72.16
KXG27283	Sorghum	plastid	65.12	71.26
Os04t0653200-01	Rice	golgi, peroxisome, plasma membrane	65.34	70.98
Zm00001d002022_P010	Maize	plastid	65.12	70.41
Zm00001d026479_P006	Maize	plastid	65.56	69.23
TraesCS2B01G534600.1	Wheat	golgi, peroxisome, plastid, vacuole	63.8	68.97
TraesCS2D01G507000.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	63.8	68.97
TraesCS2A01G506200.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	63.58	68.74
VIT_19s0015g01320.t01	Wine grape	cytosol, peroxisome, vacuole	67.11	68.16
HORVU2Hr1G112420.3	Barley	cytosol	64.02	65.46
VIT_14s0083g00390.t01	Wine grape	cytosol	21.63	61.64
VIT_08s0007g02240.t01	Wine grape	golgi, peroxisome, plasma membrane	42.83	43.3
VIT_06s0004g06570.t01	Wine grape	cytosol, peroxisome, plasma membrane	41.06	41.7
VIT_12s0057g01500.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	67.11	27.56

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	EntrezGene:100253555	wikigene:100253555	MapMan:24.2.9.1.1	EMBL:AM446013
ProteinID:CAN69667	ProteinID:CAN69667.1	InterPro:CAX	ProteinID:CCB49728	ProteinID:CCB49728.1	InterPro:CaH_exchang
UniProt:F6HBZ5	EMBL:FN595513	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816
GO:GO:0008150	GO:GO:0008324	GO:GO:0009705	GO:GO:0015369	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	GO:GO:0070588	GO:GO:0098655	EntrezGene:LOC100253555	wikigene:LOC100253555	InterPro:NaCa_Exmemb
PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF34	TIGR:TC70969	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846
TMHMM:TMhelix	UniParc:UPI0002109AF3	ArrayExpress:VIT_09s0018g01840	EnsemblPlantsGene:VIT_09s0018g01840	EnsemblPlants:VIT_09s0018g01840.t01	unigene:Vvi.5023
RefSeq:XP_002273452	RefSeq:XP_002273452.1	:	:	:	:

Description

No Description!

Coordinates

chr9:-:19317140..19328801

Molecular Weight (calculated)

49927.3 Da

IEP (calculated)

4.895

GRAVY (calculated)

0.551

Length

453 amino acids

Sequence
(BLAST)

001: MSDVVLIAIE VVEECGRFNR EMGSIEEKID LESDEEIPFS TSQGTRKVHS FDFETSHIGS HAALSTSWIF KKMRTAPLRS VYIVLIKAKI NMLLPFGPLA
101: IFLHYLTGKH GWVFFFSLLG ITPLAERLGF ATEQLAFYTG ATVGGLLNAT FGNATEMIIS MYALKHGMIR VVQQSLLGSI LSNMLLVLGC AFFTGGIKNH
201: TKVQEFNKAA ALVNSGLLLM AVMGLMFPAV LHFTHTEVHF GKSELALSRF SSCIMLVAYA SYLFFQLKSQ PNLYSPIDED TEKIEEDSDE DIPELTQWEA
301: ISWLAILTLW VSVLSGYLVD AIEGASESLN MPVAFISVIL LPIVGNAAEH ASAIMFAIKN KLDITIGVAI GSSTQIAMFV IPFCVVVGWI MGQPMDLNFQ
401: LFETATLFIA VLVVAFMLQE GTSNYFKGLM LILCYLIVAA SFFVHVDPTK DND

Best Arabidopsis Sequence Match ( AT1G55730.2 )
(BLAST)

001: MGCCKVPALI QAQVEMGLVN DVEHKSLFRR DTDSPERKAA SLMEQGSLSA SFRECSTKTP NNSVLQSFKI VILSNKLNLL LPFGPLAILL HYLTDNKGWI
101: FLLSLVGITP LAERLGYATE QLACYTGSTV GGLLNATFGN VTELIISIFA LKSGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFSQKE QVFDKGNAVV
201: NSGLLLMAVM GLLFPAVLHY THSEVHAGSS ELALSRFSSC IMLVAYAAYL FFQLKSQPSS YTPLTEETNQ NEETSDDDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWKIP ISFISVILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG AQMDLNFQLF ETATLFITVI
401: VVAFFLQEGT SNYFKGLMLI LCYLIVAASF FVHEDPHQDD I

Arabidopsis Description

CAX5Vacuolar cation/proton exchanger 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L783]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.