CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047242_P001	Maize	golgi, peroxisome, plasma membrane	94.16	96.1
Zm00001d029432_P002	Maize	golgi, peroxisome, plasma membrane	93.03	94.95
TraesCS4D01G156900.2	Wheat	cytosol, peroxisome, plasma membrane	86.07	88.45
TraesCS4B01G161500.2	Wheat	cytosol, peroxisome, plasma membrane	85.62	88.19
TraesCS4A01G156500.1	Wheat	cytosol, peroxisome, plasma membrane	85.62	88.19
Os03t0397400-01	Rice	golgi, peroxisome, plasma membrane	86.29	87.87
HORVU4Hr1G037210.1	Barley	vacuole	85.17	84.41
Solyc03g123790.2.1	Tomato	plasma membrane	68.31	79.37
GSMUA_Achr3P05680_001	Banana	plasma membrane	70.11	78.0
KXG27283	Sorghum	plastid	69.66	74.88
Solyc12g055750.1.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	71.24	73.04
PGSC0003DMT400023736	Potato	golgi, peroxisome, plasma membrane	70.79	72.58
VIT_09s0018g01840.t01	Wine grape	plasma membrane	73.03	71.74
KRH23701	Soybean	golgi, peroxisome, plasma membrane	70.11	71.4
KRH09614	Soybean	golgi, peroxisome, plasma membrane	68.54	70.28
EES06255	Sorghum	golgi, peroxisome, plasma membrane	56.63	58.74
OQU86993	Sorghum	plasma membrane	32.13	46.13
VIT_14s0083g00390.t01	Wine grape	cytosol	14.83	41.51
KXG22713	Sorghum	plasma membrane	43.6	38.65
EES04904	Sorghum	cytosol, peroxisome, vacuole	36.63	35.59

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	EntrezGene:8077092	UniProt:C5WXK5	InterPro:CAX
InterPro:CaH_exchang	ncoils:Coil	EnsemblPlants:EER94732	ProteinID:EER94732	ProteinID:EER94732.2	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150
GO:GO:0008324	GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0070588
GO:GO:0098655	InterPro:NaCa_Exmemb	PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF35	EnsemblPlantsGene:SORBI_3001G346500
TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846	TMHMM:TMhelix	UniParc:UPI00081AC4BB	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:63594627..63597978

Molecular Weight (calculated)

48418.5 Da

IEP (calculated)

4.768

GRAVY (calculated)

0.566

Length

445 amino acids

Sequence
(BLAST)

001: MMVAEKQPAL GFQQQAHAEA DEMELELASP AGSPAPLPPR KMHSLDFEHI GSLAAVAESL APGSRWRRAL TSVRVVIFQA KINVLLPFGP LAIMLHYLSG
101: THQGWVFLFS LIGITPLAER LGYATEQLAC YTGPTVGGLL NATFGNATEM IISIYALKNG MIRVVQQSLL GSILSNMLLV LGCAFFAGGL VHSNRDQVFN
201: KASAVVNSGL LLMAVLGLMF PAVLHFTHSE AQYGKSEVAL SRFSSCIMLV AYASYLFFQL KSHRSMYCPI GDEEEAAEEE EDEKEITQCE AICWLFILTI
301: WISILSGYLV DAIQGASESL NLPVAFISVI LLPIVGNAAE HASAIMFAMK NKLDITLGVA IGSSTQISMF VIPFCVVIGW MMGQEMDLNF QLFETATLFI
401: TVLVVAFMLQ EGTSNYFKGL MLILCYLIVA ASFFVHVDPD ATGEN

Best Arabidopsis Sequence Match ( AT1G55730.2 )
(BLAST)

001: MGCCKVPALI QAQVEMGLVN DVEHKSLFRR DTDSPERKAA SLMEQGSLSA SFRECSTKTP NNSVLQSFKI VILSNKLNLL LPFGPLAILL HYLTDNKGWI
101: FLLSLVGITP LAERLGYATE QLACYTGSTV GGLLNATFGN VTELIISIFA LKSGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFSQKE QVFDKGNAVV
201: NSGLLLMAVM GLLFPAVLHY THSEVHAGSS ELALSRFSSC IMLVAYAAYL FFQLKSQPSS YTPLTEETNQ NEETSDDDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWKIP ISFISVILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG AQMDLNFQLF ETATLFITVI
401: VVAFFLQEGT SNYFKGLMLI LCYLIVAASF FVHEDPHQDD I

Arabidopsis Description

CAX5Vacuolar cation/proton exchanger 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L783]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.