CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

nucleus 1
cytosol 1
vacuole 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0314300-00	Rice	cytosol, peroxisome, vacuole	70.09	71.33
KRH38810	Soybean	extracellular, golgi, vacuole	30.57	56.91
GSMUA_Achr8P19620_001	Banana	plasma membrane	51.09	56.39
KRH30353	Soybean	golgi, plasma membrane, vacuole	22.27	56.04
OQU86993	Sorghum	plasma membrane	36.03	53.23
VIT_06s0004g06570.t01	Wine grape	cytosol, peroxisome, plasma membrane	51.75	53.14
Solyc06g006110.2.1	Tomato	cytosol, peroxisome, plasma membrane	48.91	52.96
KRH17032	Soybean	golgi, peroxisome, plasma membrane	51.09	52.94
Bra012833.1-P	Field mustard	golgi, plasma membrane, plastid	48.91	52.71
CDY29050	Canola	golgi, plasma membrane, plastid	48.47	52.24
KRH72673	Soybean	golgi, peroxisome, plasma membrane	51.31	52.22
PGSC0003DMT400010643	Potato	plasma membrane	48.47	52.11
KRG98293	Soybean	cytosol, peroxisome, plasma membrane	49.56	52.06
PGSC0003DMT400030772	Potato	plasma membrane, plastid	51.53	51.75
Solyc09g005260.2.1	Tomato	plastid	51.09	51.54
KRH49368	Soybean	plastid	50.44	51.45
KRH00226	Soybean	plastid	50.44	51.45
KRH65744	Soybean	golgi, peroxisome, plasma membrane	49.13	49.89
VIT_08s0007g02240.t01	Wine grape	golgi, peroxisome, plasma membrane	48.69	49.78
KRH65739	Soybean	plastid	48.47	49.78
CDX90630	Canola	golgi, peroxisome, plasma membrane, plastid	49.78	49.57
KRH38323	Soybean	endoplasmic reticulum, extracellular, vacuole	6.99	48.48
Bra017134.1-P	Field mustard	plasma membrane	49.13	48.39
CDY18402	Canola	plasma membrane	49.13	48.39
CDX93324	Canola	plasma membrane	49.13	48.39
KRH75989	Soybean	golgi, peroxisome, plasma membrane	48.03	48.25
Bra005131.1-P	Field mustard	plasma membrane	48.91	48.17
CDX74903	Canola	golgi, peroxisome, plasma membrane, plastid	48.91	48.17
CDX91434	Canola	plasma membrane	48.69	47.96
KXG22713	Sorghum	plasma membrane	51.09	46.61
AT2G38170.3	Thale cress	plasma membrane, plastid	48.25	46.53
AT3G51860.2	Thale cress	plastid	46.72	45.73
AT5G01490.1	Thale cress	plastid	45.2	45.59
CDY40303	Canola	plastid	46.51	43.65
CDY10497	Canola	plastid	34.5	40.83
Bra009640.1-P	Field mustard	plastid	46.07	40.5
KXG27283	Sorghum	plastid	33.62	37.2
EER94732	Sorghum	cytosol, peroxisome, plasma membrane	35.59	36.63
EES06255	Sorghum	golgi, peroxisome, plasma membrane	34.28	36.6
KRH32678	Soybean	mitochondrion, plasma membrane	15.28	31.67

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	EntrezGene:8059087	UniProt:C5XZN7	InterPro:CAX
InterPro:CaH_exchang	EnsemblPlants:EES04904	ProteinID:EES04904	ProteinID:EES04904.1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006810
GO:GO:0006812	GO:GO:0006816	GO:GO:0008150	GO:GO:0008324	GO:GO:0009705	GO:GO:0015369
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0070588	GO:GO:0098655	InterPro:NaCa_Exmemb
PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF31	EnsemblPlantsGene:SORBI_3004G121400	unigene:Sbi.7867	TIGRFAMs:TIGR00378
TIGRFAMs:TIGR00846	TMHMM:TMhelix	UniParc:UPI0001A8532D	RefSeq:XP_002451928.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:+:13302331..13315878

Molecular Weight (calculated)

48788.9 Da

IEP (calculated)

6.240

GRAVY (calculated)

0.557

Length

458 amino acids

Sequence
(BLAST)

001: MASPNSGEVG AAGDLLETGL LLAASKQEEA APPAAVETTT TTTSSGRRLA EHEMTATRSR VRQVVRRAAA QLQEVFLGTK LFPLFSAVPL AVAAEHFSFG
101: RAWVFVFSFI GLAPLAERVS FLSEHVADTA GPTAGGLLNA TCGNVPELVI ALFALHKEKM EILKWSLLGS ILSNLLLVLG SSLLCGGLAN TGKERPLDRR
201: QADVSIGLLM LGVLCHILPL LSKYTTSTGD STGSVLVLSR LCAIVMLIAY FGGLVFQLKT HRQFFVQEES SQSSSSSNSD DEGTNNSVIG SASTVIWLIG
301: MTVVIAVLSN YVITTIEEAS DALGIPVRFI SIILLPVVGN AAEHAGAIIF AFKNKIDITL GIALGSATQI LLLVVPVILI VSWVNGIPMD LDLNLVETGS
401: LVMTVFTTAF TLQDGKWHYL KGFNLTLCYI VIAVCFFTIK AIPTPKKHMP EMLGLESN

Best Arabidopsis Sequence Match ( AT3G51860.1 )
(BLAST)

001: MGSIVEPWAA IAENGNANVT AKGSSRELRH GRTAHNMSSS SLRKKSDLRL VQKVPCKTLK NILSNLQEVI LGTKLTLLFL AIPLAILANS YNYGRPLIFG
101: LSLIGLTPLA ERVSFLTEQL AFYTGPTVGG LLNATCGNAT ELIIAILALA NNKVAVVKYS LLGSILSNLL LVLGTSLFFG GIANIRREQR FDRKQADVNF
201: FLLLMGLLCH LLPLLLKYAA TGEVSTSMIN KMSLTLSRTS SIVMLIAYIA YLIFQLWTHR QLFEAQQDDD DAYDDEVSVE ETPVIGFWSG FAWLVGMTIV
301: IALLSEYVVD TIEDASDSWG LSVSFISIIL LPIVGNAAEH AGAIIFAFKN KLDISLGVAL GSATQISLFV VPLSVIVAWI LGIKMDLNFN ILETSSLALA
401: IIITAFTLQD GTSHYMKGLV LLLCYVIIAA CFFVDQIPQP NDLDVGLQPM NNLGEVFSA

Arabidopsis Description

CAX3Cation exchanger 3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.