CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

nucleus 1
golgi 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17032	Soybean	golgi, peroxisome, plasma membrane	94.44	96.15
KRH30353	Soybean	golgi, plasma membrane, vacuole	33.56	82.97
KRG98293	Soybean	cytosol, peroxisome, plasma membrane	77.33	79.82
KRH38323	Soybean	endoplasmic reticulum, extracellular, vacuole	11.56	78.79
KRH38810	Soybean	extracellular, golgi, vacuole	38.0	69.51
VIT_06s0004g06570.t01	Wine grape	cytosol, peroxisome, plasma membrane	68.89	69.51
Solyc06g006110.2.1	Tomato	cytosol, peroxisome, plasma membrane	63.56	67.61
PGSC0003DMT400010643	Potato	plasma membrane	63.78	67.37
KRH65744	Soybean	golgi, peroxisome, plasma membrane	64.0	63.86
OQU86993	Sorghum	plasma membrane	43.56	63.23
KRH00226	Soybean	plastid	62.89	63.03
GSMUA_Achr3P29210_001	Banana	golgi, peroxisome, plasma membrane	63.56	62.45
GSMUA_Achr4P06590_001	Banana	cytosol, golgi, peroxisome	51.33	62.43
KRH49368	Soybean	plastid	62.22	62.36
KRH75989	Soybean	golgi, peroxisome, plasma membrane	62.0	61.18
TraesCS2A01G444600.1	Wheat	plasma membrane	59.11	61.15
KRH65739	Soybean	plastid	60.44	60.99
Os01t0557500-01	Rice	vacuole	60.44	60.31
TraesCS2D01G443700.2	Wheat	plasma membrane	58.67	59.73
TraesCS3A01G202800.1	Wheat	plastid	60.67	59.09
TraesCS3D01G206400.1	Wheat	plastid	60.67	59.09
Zm00001d044533_P003	Maize	golgi, mitochondrion, peroxisome, plasma membrane, plastid	60.67	59.09
HORVU2Hr1G102840.16	Barley	endoplasmic reticulum, plasma membrane	59.33	58.68
TraesCS2B01G465600.1	Wheat	plastid	59.56	58.26
GSMUA_Achr8P19620_001	Banana	plasma membrane	52.0	56.39
Zm00001d009397_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	12.0	56.25
Os05t0594200-01	Rice	plastid	55.11	54.75
HORVU3Hr1G049060.8	Barley	endoplasmic reticulum, peroxisome, plasma membrane, plastid	56.22	53.38
Os02t0314300-00	Rice	cytosol, peroxisome, vacuole	52.89	52.89
KXG22713	Sorghum	plasma membrane	57.33	51.39
EES04904	Sorghum	cytosol, peroxisome, vacuole	52.22	51.31
KRH58038	Soybean	plasma membrane	33.78	50.5
Zm00001d009763_P001	Maize	cytosol, mitochondrion, plasma membrane, plastid	57.78	50.39
KRH46490	Soybean	golgi, peroxisome, plasma membrane	42.44	44.63
KRH23701	Soybean	golgi, peroxisome, plasma membrane	41.33	42.56
KRH32678	Soybean	mitochondrion, plasma membrane	20.89	42.53
KRG98412	Soybean	plasma membrane	42.67	42.38
KRH09614	Soybean	golgi, peroxisome, plasma membrane	40.44	41.94
KRH47395	Soybean	mitochondrion	16.67	33.94
KRH46489	Soybean	cytosol, peroxisome, plasma membrane	38.22	23.96

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	EntrezGene:100802344	MapMan:24.2.9.1.1	EMBL:ACUP02001227	InterPro:CAX
InterPro:CaH_exchang	EnsemblPlantsGene:GLYMA_02G226500	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816
GO:GO:0008150	GO:GO:0008324	GO:GO:0009705	GO:GO:0015369	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	GO:GO:0070588	GO:GO:0098655	UniProt:I1JHC6	EnsemblPlants:KRH72673	ProteinID:KRH72673
ProteinID:KRH72673.1	InterPro:NaCa_Exmemb	PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF9	TIGRFAMs:TIGR00378
TIGRFAMs:TIGR00846	TMHMM:TMhelix	UniParc:UPI0002963EEC	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:41337759..41343807

Molecular Weight (calculated)

48949.4 Da

IEP (calculated)

6.306

GRAVY (calculated)

0.589

Length

450 amino acids

Sequence
(BLAST)

001: MHMNTYSEAT TSQLPIPPTM DEDLENNTEV CDGNNAMTPM VRKKSELVVV ANNNSRLQML RNFMTNLQEV FFGTKLVVLF PAVPLAVVAN FYSFGRPWIF
101: AFSLLGLAPL AERVSFLTEQ IAYFTGPTVG GLLNATCGNA TEMIIALLAL HQNKVHVVKL SLLGSILSNL LLVLGSSLLC GGLANLKREQ RYDRKQADVN
201: SLLLLLGLLC HLLPLLFKYA LGGGDHSIAT STLQLSRASS VVMLLAYAAY IFFQLKTHRK LFDAQEVDDD EEKAVIGFWS AFTWLVGMTL VISLLSEYVV
301: GTIEAASDSW GISVSFISII LLPIVGNAAE HAGSIIFAYK NKLDISLGVA MGSATQISMF VVPLSVVVAW IMGIRMDLDF SLLETGCLAF TIIITAFTLQ
401: DGTSHYMKGV ILTLCYIVIG ACFFVLKTPL IGQSPKASFG VKPSFEAITT

Best Arabidopsis Sequence Match ( AT2G38170.1 )
(BLAST)

001: MAGIVTEPWS VAENGNPSIT AKGSSRELRL GRTAHNMSSS SLRKKSDLRV IQKVPYKGLK DFLSNLQEVI LGTKLAILFP AIPAAIICTY CGVSQPWIFG
101: LSLLGLTPLA ERVSFLTEQL AFYTGPTLGG LLNATCGNAT ELIIAILALT NNKVAVVKYS LLGSILSNLL LVLGTSLFCG GIANIRREQR FDRKQADVNF
201: FLLLLGFLCH LLPLLVGYLK NGEASAAVLS DMQLSISRGF SIVMLISYIA YLVFQLWTHR QLFDAQEQED EYDDDVEQET AVISFWSGFA WLVGMTLVIA
301: LLSEYVVATI EEASDKWNLS VSFISIILLP IVGNAAEHAG AVIFAFKNKL DISLGVALGS ATQIGLFVVP LTIIVAWILG INMDLNFGPL ETGCLAVSII
401: ITAFTLQDGS SHYMKGLVLL LCYFIIAICF FVDKLPQKQN AIHLGHQAMN NVVTATGGGV FSS

Arabidopsis Description

CAX1AT2G38170 protein [Source:UniProtKB/TrEMBL;Acc:B9DFT4]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.