CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 5
peroxisome 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13320.1	KRG89812	AT2G41090.1	17360592
AT3G13320.1	KRG94975	AT2G41090.1	17360592
AT3G13320.1	KRH18664	AT2G41090.1	17360592
AT3G13320.1	KRG89812	AT2G41100.1	17360592
AT3G13320.1	KRG94975	AT2G41100.1	17360592
AT3G13320.1	KRH18664	AT2G41100.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46490	Soybean	golgi, peroxisome, plasma membrane	61.09	31.54
KRG98412	Soybean	plasma membrane	59.73	29.14
VIT_19s0015g01320.t01	Wine grape	cytosol, peroxisome, vacuole	51.13	25.34
Bra030840.1-P	Field mustard	plasma membrane	46.15	24.82
CDY42379	Canola	plasma membrane	46.15	24.82
CDY10539	Canola	plasma membrane	46.15	24.82
KRH23701	Soybean	golgi, peroxisome, plasma membrane	48.42	24.49
CDY23589	Canola	golgi, peroxisome, plasma membrane	47.06	24.47
AT1G55730.2	Thale cress	plasma membrane	47.96	24.04
Bra034690.1-P	Field mustard	cytosol, peroxisome, plasma membrane	47.96	24.04
CDY44007	Canola	cytosol, peroxisome, plasma membrane	47.51	23.86
CDY24195	Canola	golgi, peroxisome, plasma membrane	47.06	23.69
CDY43356	Canola	golgi, peroxisome, plasma membrane	47.06	23.53
GSMUA_Achr5P05070_001	Banana	cytosol, peroxisome, plasma membrane	47.06	23.01
CDY26090	Canola	plasma membrane	45.7	22.9
AT3G13320.1	Thale cress	golgi, peroxisome, vacuole	45.7	22.9
KRH09614	Soybean	golgi, peroxisome, plasma membrane	44.34	22.58
CDX75703	Canola	peroxisome	46.61	22.39
Bra039385.1-P	Field mustard	plasma membrane	47.51	22.25
KRH32678	Soybean	mitochondrion, plasma membrane	21.72	21.72
AT1G55720.1	Thale cress	plasma membrane	45.7	21.63
TraesCS6D01G096900.1	Wheat	mitochondrion	44.34	21.4
TraesCS6B01G137200.1	Wheat	mitochondrion	44.34	21.4
EES06255	Sorghum	golgi, peroxisome, plasma membrane	41.18	21.21
Bra001499.1-P	Field mustard	mitochondrion	46.61	20.72
CDX82545	Canola	mitochondrion	46.61	20.6
TraesCS6A01G108700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, peroxisome	44.8	20.29
KRH58038	Soybean	plasma membrane	25.79	18.94
KRH38810	Soybean	extracellular, golgi, vacuole	20.81	18.7
KRH00226	Soybean	plastid	34.84	17.15
KRH65744	Soybean	golgi, peroxisome, plasma membrane	34.84	17.07
GSMUA_Achr3P05320_001	Banana	cytosol, peroxisome, plasma membrane	35.29	16.99
KRG98293	Soybean	cytosol, peroxisome, plasma membrane	33.48	16.97
KRH17032	Soybean	golgi, peroxisome, plasma membrane	33.94	16.97
KRH49368	Soybean	plastid	34.39	16.93
KRH72673	Soybean	golgi, peroxisome, plasma membrane	33.94	16.67
KRH75989	Soybean	golgi, peroxisome, plasma membrane	34.39	16.67
KRH65739	Soybean	plastid	32.58	16.14
KRH46489	Soybean	cytosol, peroxisome, plasma membrane	50.68	15.6
Zm00001d015225_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	25.79	11.8
KRH30353	Soybean	golgi, plasma membrane, vacuole	0.9	1.1
KRH38323	Soybean	endoplasmic reticulum, extracellular, vacuole	0.0	0.0
Os02t0138900-01	Rice	golgi, plasma membrane	0.0	0.0

Protein Annotations

EntrezGene:100799616	MapMan:24.2.9.1.1	EMBL:ACUP02004149	EnsemblPlantsGene:GLYMA_07G026800	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005773	GO:GO:0006810	GO:GO:0008150
GO:GO:0009705	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR013136	UniProt:K7KZB1
EnsemblPlants:KRH47395	ProteinID:KRH47395	ProteinID:KRH47395.1	InterPro:NaCa_Exmemb	PFAM:PF01699	PFAM:PF10537
PFscan:PS51136	PANTHER:PTHR31503	PANTHER:PTHR31503:SF34	TMHMM:TMhelix	UniParc:UPI0002969C49	InterPro:WSTF_Acf1_Cbp146

Description

hypothetical protein

Coordinates

chr7:+:2100016..2104324

Molecular Weight (calculated)

24787.7 Da

IEP (calculated)

9.921

GRAVY (calculated)

0.214

Length

221 amino acids

Sequence
(BLAST)

001: MRESRFHRTR LVLRLQHSLR VRQGQSDYLN RLNQYRQRVW TCKITGKSGL TYEEALVLEK HAAEKVQQIP EELVAPALRI IHYTDRLAGM IYRSIQVVVF
101: SNKLNLLMPF GPLAILVQKL TGHLGWVFGL SLLGIMPLAE RLGYATEQLA FYTGDTVGGL LNATFGNATE LIISIYALKS GMTRVVQLSL LGSILSNMLL
201: VLGCAFLCGG IVNHEKEQVF N

Best Arabidopsis Sequence Match ( AT1G55720.1 )
(BLAST)

001: MYMELYLMFS NFFKSIRWCK VPAFMQAKVE MGLVNEVELK SLLEQETDSP QTNAASLMEQ GSLRERRAKA PRNSVVQSFK IVILSNKLNL LLPFGPLAIL
101: VHYLTDNKGW FFLLSLVGIT PLAERLGYAT EQLSCYTGAT VGGLLNATFG NVIELIISII ALKNGMIRVV QLTLLGSILS NILLVLGCAF FCGGLVFPGK
201: DQVFDKRNAV VSSGMLLMAV MGLLFPTFLH YTHSEVHAGS SELALSRFIS CIMLVAYAAY LFFQLKSQPS FYTEKTNQNE ETSNDDEDPE ISKWEAIIWL
301: SIFTAWVSLL SGYLVDAIEG TSVSWKIPIS FISVILLPIV GNAAEHAGAI MFAMKDKLDL SLGVAIGSSI QISMFAVPFC VVIGWMMGAQ MDLNLQLFET
401: ATLLITVIVV AFFLQLEGTS NYFKRLMLIL CYLIVAASFF VHEDPHQGTD HQQICTCRTP SYTYEIL

Arabidopsis Description

ATCAX6cation exchanger 6 [Source:TAIR;Acc:AT1G55720]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.