Factsheet for Bra001499.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13320.1	Bra000214.1-P	AT2G41090.1	17360592
AT3G13320.1	Bra000214.1-P	AT2G41100.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82545	Canola	mitochondrion	98.39	97.8
Bra034690.1-P	Field mustard	cytosol, peroxisome, plasma membrane	83.5	94.1
AT3G13320.1	Thale cress	golgi, peroxisome, vacuole	80.28	90.48
Bra039385.1-P	Field mustard	plasma membrane	83.1	87.5
Bra030840.1-P	Field mustard	plasma membrane	67.61	81.75
KRH58038	Soybean	plasma membrane	45.07	74.42
VIT_19s0015g01320.t01	Wine grape	cytosol, peroxisome, vacuole	62.37	69.51
KRH46490	Soybean	golgi, peroxisome, plasma membrane	59.36	68.93
Os02t0138900-01	Rice	golgi, plasma membrane	34.21	67.73
GSMUA_Achr5P05070_001	Banana	cytosol, peroxisome, plasma membrane	60.97	67.04
KRG98412	Soybean	plasma membrane	59.36	65.12
EES06255	Sorghum	golgi, peroxisome, plasma membrane	52.52	60.84
GSMUA_Achr3P05320_001	Banana	cytosol, peroxisome, plasma membrane	55.94	60.57
TraesCS6D01G096900.1	Wheat	mitochondrion	53.32	57.86
TraesCS6B01G137200.1	Wheat	mitochondrion	52.72	57.21
TraesCS6A01G108700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, peroxisome	53.12	54.1
KRH47395	Soybean	mitochondrion	20.72	46.61
Bra012833.1-P	Field mustard	golgi, plasma membrane, plastid	39.84	46.59
Zm00001d015225_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	42.25	43.48
Bra005131.1-P	Field mustard	plasma membrane	39.44	42.15
Bra017134.1-P	Field mustard	plasma membrane	39.24	41.94
KRH46489	Soybean	cytosol, peroxisome, plasma membrane	54.53	37.74
Bra009640.1-P	Field mustard	plastid	37.42	35.7

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	EnsemblPlantsGene:Bra001499	EnsemblPlants:Bra001499.1	EnsemblPlants:Bra001499.1-P
InterPro:CAX	InterPro:CaH_exchang	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150	GO:GO:0008324	GO:GO:0015369
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0070588	GO:GO:0098655	UniProt:M4CBB9
InterPro:NaCa_Exmemb	PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF34	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846
TMHMM:TMhelix	UniParc:UPI000254087C	SEG:seg	:	:	:

Description

AT3G13320 (E=3e-215) CAX2, atcax2 | CAX2 (CATION EXCHANGER 2); calcium:cation antiporter/ calcium:hydrogen antiporter

Coordinates

chrA03:+:16687502..16690405

Molecular Weight (calculated)

54682.9 Da

IEP (calculated)

5.399

GRAVY (calculated)

0.427

Length

497 amino acids

Sequence
(BLAST)

001: MRDLLSGTTV VKRSHTRRKF IPFSPCFGSH ERVMSHCKVP ALIEAQVEMG SVNELEHKSL FRREEDDSTQ AKAASLMEQG SLSPSFHEHA TKSPKNSVIK
101: SIKIVILSNK LNLLLPFGPL AILVHYMVDS KGWVFLLSLI GITPLAERLG YATEQLAFYT GPTVGGLLNA TFGNVTELII SIFALKNGMI RVVQQTLLGS
201: ILSNMLLVLG CAFFCGGLVF HQKDQVFDKG IAVVNSGLLL MAVMGILFPA VLYYTHSEVH TGSSELALSR FSSCIMLIAY AAYLFFQLKS QSSSYSRLEE
301: EANQNEEASG EDEDPEISKW EAIIWLSILT AWVSLLSGYL VDAIEGASVS WNIPIAFISV ILLPIVGNAA EHAGAIMFAM KDKLDLSLGV AIGSSIQISM
401: FVVPFCVVIG WMMGEQMDLN FQLFETAMLF ITVIVVAFFL QEGTSNYFKG LMLILCYLIV AASFFVHEDP HQESGVKQVG SSLQADDFTN TKFWGEM

Best Arabidopsis Sequence Match ( AT3G13320.1 )
(BLAST)

001: MSCCKVPVLI EAQVEMVSAN ELENKSLFRQ EEDATQTKEA SLMEQGSLST SFPQHTPKAP KNSVLNSIKI VIFCNKLNLL LPFGPLAILV HYMIDSKGWV
101: FLLTLVGITP LAERLGYATE QLACYTGPTV GGLLNATFGN VTELIISIFA LKNGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFYQKD QVFDKGIATV
201: NSGLLLMAVM GILFPAVLHY THSEVHAGSS ELALSRFSSC IMLIAYAAYL FFQLKSQSNS YSPLDEESNQ NEETSAEDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWNIP IAFISTILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG QQMDLNFQLF ETAMLFITVI
401: VVAFFLQEGS SNYFKGLMLI LCYLIVAASF FVHEDPHQDG I

Arabidopsis Description

CAX2Vacuolar cation/proton exchanger 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39254]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.