CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	golgi, mitochondrion, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13320.1	KRG89812	AT2G41090.1	17360592
AT3G13320.1	KRG94975	AT2G41090.1	17360592
AT3G13320.1	KRH18664	AT2G41090.1	17360592
AT3G13320.1	KRG89812	AT2G41100.1	17360592
AT3G13320.1	KRG94975	AT2G41100.1	17360592
AT3G13320.1	KRH18664	AT2G41100.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58038	Soybean	plasma membrane	65.19	92.69
KRG98412	Soybean	plasma membrane	93.46	88.3
VIT_19s0015g01320.t01	Wine grape	cytosol, peroxisome, vacuole	72.66	69.73
CDY23589	Canola	golgi, peroxisome, plasma membrane	68.46	68.94
CDY24195	Canola	golgi, peroxisome, plasma membrane	68.69	66.97
Bra030840.1-P	Field mustard	plasma membrane	64.25	66.91
CDY44007	Canola	cytosol, peroxisome, plasma membrane	68.69	66.82
CDY43356	Canola	golgi, peroxisome, plasma membrane	68.93	66.74
AT1G55730.2	Thale cress	plasma membrane	68.69	66.67
Bra034690.1-P	Field mustard	cytosol, peroxisome, plasma membrane	68.69	66.67
CDY42379	Canola	plasma membrane	64.02	66.67
KRH23701	Soybean	golgi, peroxisome, plasma membrane	67.99	66.59
CDY10539	Canola	plasma membrane	63.78	66.42
AT3G13320.1	Thale cress	golgi, peroxisome, vacuole	67.76	65.76
KRH09614	Soybean	golgi, peroxisome, plasma membrane	66.36	65.44
Os02t0138900-01	Rice	golgi, plasma membrane	38.32	65.34
GSMUA_Achr5P05070_001	Banana	cytosol, peroxisome, plasma membrane	68.46	64.82
CDX75703	Canola	peroxisome	68.93	64.13
CDY26090	Canola	plasma membrane	64.72	62.81
Bra039385.1-P	Field mustard	plasma membrane	68.46	62.08
KRH47395	Soybean	mitochondrion	31.54	61.09
AT1G55720.1	Thale cress	plasma membrane	65.89	60.39
GSMUA_Achr3P05320_001	Banana	cytosol, peroxisome, plasma membrane	64.02	59.7
Bra001499.1-P	Field mustard	mitochondrion	68.93	59.36
CDX82545	Canola	mitochondrion	68.93	59.0
EES06255	Sorghum	golgi, peroxisome, plasma membrane	58.88	58.74
TraesCS6D01G096900.1	Wheat	mitochondrion	61.92	57.86
TraesCS6B01G137200.1	Wheat	mitochondrion	61.68	57.64
TraesCS6A01G108700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, peroxisome	61.92	54.3
KRH30353	Soybean	golgi, plasma membrane, vacuole	22.66	53.3
KRH38810	Soybean	extracellular, golgi, vacuole	30.37	52.85
KRH38323	Soybean	endoplasmic reticulum, extracellular, vacuole	7.71	50.0
KRG98293	Soybean	cytosol, peroxisome, plasma membrane	46.03	45.18
KRH46489	Soybean	cytosol, peroxisome, plasma membrane	73.36	43.73
KRH00226	Soybean	plastid	45.79	43.65
KRH17032	Soybean	golgi, peroxisome, plasma membrane	44.86	43.44
KRH49368	Soybean	plastid	45.56	43.43
KRH65744	Soybean	golgi, peroxisome, plasma membrane	44.86	42.57
KRH72673	Soybean	golgi, peroxisome, plasma membrane	44.63	42.44
KRH75989	Soybean	golgi, peroxisome, plasma membrane	45.09	42.32
KRH65739	Soybean	plastid	43.93	42.15
Zm00001d015225_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	46.73	41.41
KRH32678	Soybean	mitochondrion, plasma membrane	14.72	28.51

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	UniProt:A0A0R0IWP5	EMBL:ACUP02005346	InterPro:CAX
InterPro:CaH_exchang	EnsemblPlantsGene:GLYMA_08G337000	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006812	GO:GO:0006816	GO:GO:0008150	GO:GO:0008324	GO:GO:0015369	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	GO:GO:0070588	GO:GO:0098655	EnsemblPlants:KRH46490	ProteinID:KRH46490
ProteinID:KRH46490.1	InterPro:NaCa_Exmemb	PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF34	TIGRFAMs:TIGR00378
TIGRFAMs:TIGR00846	TMHMM:TMhelix	UniParc:UPI00023390CF	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:-:45388416..45393976

Molecular Weight (calculated)

46637.0 Da

IEP (calculated)

5.007

GRAVY (calculated)

0.538

Length

428 amino acids

Sequence
(BLAST)

001: MGSPNGRAMY RTDDEVPFDS EINFHPSESS LMDVHGSHSG ESRTVHHETL AGMIYRSIQV VVFSNKLNLL MPFGPLAILV QKLTGHLGWV FGLSLLGIMP
101: LAERLGYATE QLAFYTGDTV GGLLNATFGN ATELIISIYA LKSGMTRVVQ LSLLGSILSN MLLVLGCAFL CGGIVNHEKE QVFNKAAASV NSGLLLMAVM
201: GILFPAVLHY THTEVHVGKS ELSLSRFSSC IMLVAYVAYL FFQLKSQRNL YVSVNEDEGQ NGNNSNDDES SDISKWETII WLSVMTAWIS ILSEYLVGAI
301: EGASTAWEIP VAFISVILLP LVGNAAEHAS AIMFAMKDKL DISLGVAIGS STQISMFVIP FCVVIGWITG HPMDLNFQLF ETAVLFLTVI VVAFMLQEGT
401: ANYFKGLMLI LCYLIVAASF YVHVDSSQ

Best Arabidopsis Sequence Match ( AT1G55730.2 )
(BLAST)

001: MGCCKVPALI QAQVEMGLVN DVEHKSLFRR DTDSPERKAA SLMEQGSLSA SFRECSTKTP NNSVLQSFKI VILSNKLNLL LPFGPLAILL HYLTDNKGWI
101: FLLSLVGITP LAERLGYATE QLACYTGSTV GGLLNATFGN VTELIISIFA LKSGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFSQKE QVFDKGNAVV
201: NSGLLLMAVM GLLFPAVLHY THSEVHAGSS ELALSRFSSC IMLVAYAAYL FFQLKSQPSS YTPLTEETNQ NEETSDDDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWKIP ISFISVILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG AQMDLNFQLF ETATLFITVI
401: VVAFFLQEGT SNYFKGLMLI LCYLIVAASF FVHEDPHQDD I

Arabidopsis Description

CAX5Vacuolar cation/proton exchanger 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L783]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.