Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH38323 | Soybean | endoplasmic reticulum, extracellular, vacuole | 27.47 | 75.76 |
| KRH38810 | Soybean | extracellular, golgi, vacuole | 64.84 | 47.97 |
| KRG98293 | Soybean | cytosol, peroxisome, plasma membrane | 95.05 | 39.68 |
| OQU86993 | Sorghum | plasma membrane | 66.48 | 39.03 |
| KRH17032 | Soybean | golgi, peroxisome, plasma membrane | 82.97 | 34.16 |
| KRH72673 | Soybean | golgi, peroxisome, plasma membrane | 82.97 | 33.56 |
| VIT_06s0004g06570.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 78.57 | 32.06 |
| KRH58038 | Soybean | plasma membrane | 52.75 | 31.89 |
| Solyc06g006110.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 69.23 | 29.79 |
| PGSC0003DMT400010643 | Potato | plasma membrane | 69.23 | 29.58 |
| KRH75989 | Soybean | golgi, peroxisome, plasma membrane | 73.63 | 29.39 |
| KRH00226 | Soybean | plastid | 71.98 | 29.18 |
| KRH49368 | Soybean | plastid | 71.98 | 29.18 |
| KRH65744 | Soybean | golgi, peroxisome, plasma membrane | 71.98 | 29.05 |
| GSMUA_Achr3P29210_001 | Banana | golgi, peroxisome, plasma membrane | 70.88 | 28.17 |
| KRH65739 | Soybean | plastid | 68.13 | 27.8 |
| TraesCS2A01G444600.1 | Wheat | plasma membrane | 65.38 | 27.36 |
| TraesCS3D01G206400.1 | Wheat | plastid | 69.23 | 27.27 |
| TraesCS3A01G202800.1 | Wheat | plastid | 69.23 | 27.27 |
| Os01t0557500-01 | Rice | vacuole | 67.03 | 27.05 |
| TraesCS2D01G443700.2 | Wheat | plasma membrane | 65.38 | 26.92 |
| HORVU2Hr1G102840.16 | Barley | endoplasmic reticulum, plasma membrane | 65.38 | 26.15 |
| TraesCS2B01G465600.1 | Wheat | plastid | 65.38 | 25.87 |
| Zm00001d044533_P003 | Maize | golgi, mitochondrion, peroxisome, plasma membrane, plastid | 65.38 | 25.76 |
| Os05t0594200-01 | Rice | plastid | 63.74 | 25.61 |
| GSMUA_Achr8P19620_001 | Banana | plasma membrane | 56.04 | 24.58 |
| Os02t0314300-00 | Rice | cytosol, peroxisome, vacuole | 59.34 | 24.0 |
| KXG22713 | Sorghum | plasma membrane | 64.84 | 23.51 |
| Zm00001d009763_P001 | Maize | cytosol, mitochondrion, plasma membrane, plastid | 65.38 | 23.06 |
| Zm00001d009397_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane | 12.09 | 22.92 |
| HORVU3Hr1G049060.8 | Barley | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 59.34 | 22.78 |
| KRH46490 | Soybean | golgi, peroxisome, plasma membrane | 53.3 | 22.66 |
| EES04904 | Sorghum | cytosol, peroxisome, vacuole | 56.04 | 22.27 |
| KRH23701 | Soybean | golgi, peroxisome, plasma membrane | 52.2 | 21.74 |
| KRH09614 | Soybean | golgi, peroxisome, plasma membrane | 51.65 | 21.66 |
| KRG98412 | Soybean | plasma membrane | 52.75 | 21.19 |
| GSMUA_Achr4P06590_001 | Banana | cytosol, golgi, peroxisome | 37.36 | 18.38 |
| KRH46489 | Soybean | cytosol, peroxisome, plasma membrane | 49.45 | 12.53 |
| KRH32678 | Soybean | mitochondrion, plasma membrane | 10.44 | 8.6 |
| KRH47395 | Soybean | mitochondrion | 1.1 | 0.9 |
Protein Annotations
| EMBL:ACUP02007000 | EnsemblPlants:KRH30353 | EnsemblPlantsGene:GLYMA_11G178700 | Gene3D:1.20.1420.30 | Gene3D:1.20.58.1130 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:NaCa_Exmemb |
| PANTHER:PTHR31503 | PANTHER:PTHR31503:SF9 | PFAM:PF01699 | ProteinID:KRH30353 | ProteinID:KRH30353.1 | TMHMM:TMhelix |
| UniParc:UPI0006EE058D | UniProt:A0A0R0HIN5 | MapMan:24.2.9.1.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr11:+:24245243..24246695
Molecular Weight (calculated)
19877.5 Da
IEP (calculated)
4.300
GRAVY (calculated)
0.880
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MIIMHRTLSQ GDENEDEEKA VIGFRSAFSW LVEMTLIISL LSEYVVATIE AASDSWGISV SFISIILLPI VGNAAEHVGS IIFAFKNKLD ISLGVAMGSA
101: TQISMFVVPF SVVIAWIMGI EMDLDFNLLE TGCLAFTIIV TAFTLQDGTS HYLKGVVLFL CYIIIAACFF VHKTSTPLIN QA
101: TQISMFVVPF SVVIAWIMGI EMDLDFNLLE TGCLAFTIIV TAFTLQDGTS HYLKGVVLFL CYIIIAACFF VHKTSTPLIN QA
001: MAGIVTEPWS VAENGNPSIT AKGSSRELRL GRTAHNMSSS SLRKKSDLRV IQKVPYKGLK DFLSNLQEVI LGTKLAILFP AIPAAIICTY CGVSQPWIFG
101: LSLLGLTPLA ERVSFLTEQL AFYTGPTLGG LLNATCGNAT ELIIAILALT NNKVAVVKYS LLGSILSNLL LVLGTSLFCG GIANIRREQR FDRKQADVNF
201: FLLLLGFLCH LLPLLVGYLK NGEASAAVLS DMQLSISRGF SIVMLISYIA YLVFQLWTHR QLFDAQEQED EYDDDVEQET AVISFWSGFA WLVGMTLVIA
301: LLSEYVVATI EEASDKWNLS VSFISIILLP IVGNAAEHAG AVIFAFKNKL DISLGVALGS ATQIGLFVVP LTIIVAWILG INMDLNFGPL ETGCLAVSII
401: ITAFTLQDGS SHYMKGLVLL LCYFIIAICF FVDKLPQKQN AIHLGHQAMN NVVTATGGGV FSS
101: LSLLGLTPLA ERVSFLTEQL AFYTGPTLGG LLNATCGNAT ELIIAILALT NNKVAVVKYS LLGSILSNLL LVLGTSLFCG GIANIRREQR FDRKQADVNF
201: FLLLLGFLCH LLPLLVGYLK NGEASAAVLS DMQLSISRGF SIVMLISYIA YLVFQLWTHR QLFDAQEQED EYDDDVEQET AVISFWSGFA WLVGMTLVIA
301: LLSEYVVATI EEASDKWNLS VSFISIILLP IVGNAAEHAG AVIFAFKNKL DISLGVALGS ATQIGLFVVP LTIIVAWILG INMDLNFGPL ETGCLAVSII
401: ITAFTLQDGS SHYMKGLVLL LCYFIIAICF FVDKLPQKQN AIHLGHQAMN NVVTATGGGV FSS
Arabidopsis Description
CAX1AT2G38170 protein [Source:UniProtKB/TrEMBL;Acc:B9DFT4]
SUBAcon: [plasma membrane,plastid]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.