CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
golgi 1
vacuole 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49368	Soybean	plastid	95.99	95.99
KRH38810	Soybean	extracellular, golgi, vacuole	50.78	92.68
KRH65744	Soybean	golgi, peroxisome, plasma membrane	77.73	77.38
KRH75989	Soybean	golgi, peroxisome, plasma membrane	77.73	76.54
KRH65739	Soybean	plastid	74.83	75.34
KRH30353	Soybean	golgi, plasma membrane, vacuole	29.18	71.98
VIT_08s0007g02240.t01	Wine grape	golgi, peroxisome, plasma membrane	71.49	71.65
CDY29050	Canola	golgi, plasma membrane, plastid	67.26	71.06
Bra012833.1-P	Field mustard	golgi, plasma membrane, plastid	67.04	70.82
PGSC0003DMT400030772	Potato	plasma membrane, plastid	71.71	70.61
Solyc09g005260.2.1	Tomato	plastid	71.05	70.26
CDX93324	Canola	plasma membrane	71.71	69.25
CDY18402	Canola	plasma membrane	71.71	69.25
Bra017134.1-P	Field mustard	plasma membrane	71.71	69.25
CDX74903	Canola	golgi, peroxisome, plasma membrane, plastid	71.27	68.82
Bra005131.1-P	Field mustard	plasma membrane	71.27	68.82
CDX90630	Canola	golgi, peroxisome, plasma membrane, plastid	70.16	68.48
CDX91434	Canola	plasma membrane	70.82	68.39
KRH38323	Soybean	endoplasmic reticulum, extracellular, vacuole	10.02	68.18
KRG98293	Soybean	cytosol, peroxisome, plasma membrane	63.47	65.37
GSMUA_Achr3P29210_001	Banana	golgi, peroxisome, plasma membrane	66.15	64.85
TraesCS2A01G444600.1	Wheat	plasma membrane	62.81	64.83
KRH17032	Soybean	golgi, peroxisome, plasma membrane	63.47	64.48
AT3G51860.2	Thale cress	plastid	66.82	64.1
AT2G38170.3	Thale cress	plasma membrane, plastid	67.71	64.0
OQU86993	Sorghum	plasma membrane	43.88	63.55
KRH72673	Soybean	golgi, peroxisome, plasma membrane	63.03	62.89
HORVU2Hr1G102840.16	Barley	endoplasmic reticulum, plasma membrane	63.7	62.86
TraesCS2D01G443700.2	Wheat	plasma membrane	61.02	61.99
TraesCS3D01G206400.1	Wheat	plastid	63.7	61.9
GSMUA_Achr4P06590_001	Banana	cytosol, golgi, peroxisome	51.0	61.89
TraesCS2B01G465600.1	Wheat	plastid	63.25	61.74
TraesCS3A01G202800.1	Wheat	plastid	63.25	61.47
Zm00001d044533_P003	Maize	golgi, mitochondrion, peroxisome, plasma membrane, plastid	62.81	61.04
Os01t0557500-01	Rice	vacuole	61.25	60.98
Os05t0594200-01	Rice	plastid	58.35	57.84
HORVU3Hr1G049060.8	Barley	endoplasmic reticulum, peroxisome, plasma membrane, plastid	59.91	56.75
KXG22713	Sorghum	plasma membrane	61.47	54.98
GSMUA_Achr8P19620_001	Banana	plasma membrane	50.11	54.22
Os02t0314300-00	Rice	cytosol, peroxisome, vacuole	53.23	53.11
Zm00001d009763_P001	Maize	cytosol, mitochondrion, plasma membrane, plastid	60.36	52.52
EES04904	Sorghum	cytosol, peroxisome, vacuole	51.45	50.44
Zm00001d009397_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	10.69	50.0
KRH58038	Soybean	plasma membrane	33.18	49.5
KRH46490	Soybean	golgi, peroxisome, plasma membrane	43.65	45.79
KRH23701	Soybean	golgi, peroxisome, plasma membrane	42.32	43.48
KRH09614	Soybean	golgi, peroxisome, plasma membrane	41.2	42.63
KRG98412	Soybean	plasma membrane	42.76	42.38
KRH32678	Soybean	mitochondrion, plasma membrane	17.37	35.29
KRH47395	Soybean	mitochondrion	17.15	34.84
KRH46489	Soybean	cytosol, peroxisome, plasma membrane	38.31	23.96

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	EntrezGene:100816231	MapMan:24.2.9.1.1	EMBL:ACUP02011407	InterPro:CAX
InterPro:CaH_exchang	EnsemblPlantsGene:GLYMA_18G200500	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816
GO:GO:0008150	GO:GO:0008324	GO:GO:0009705	GO:GO:0015369	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	GO:GO:0070588	GO:GO:0098655	UniProt:K7MTI1	EnsemblPlants:KRH00226	ProteinID:KRH00226
ProteinID:KRH00226.1	ProteinID:KRH00227.1	InterPro:NaCa_Exmemb	PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF1
TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846	TMHMM:TMhelix	UniParc:UPI000233F289	SEG:seg	:

Description

hypothetical protein

Coordinates

chr18:-:48016361..48020799

Molecular Weight (calculated)

48545.9 Da

IEP (calculated)

5.636

GRAVY (calculated)

0.614

Length

449 amino acids

Sequence
(BLAST)

001: MGSHQQEPWL LENGKPRVLT KENRHGRSAH SMSSTSLRKK SSRTLVSKLP CATLRSILLN LQEVILGTKL SILIPAIPAA IIAECYGFGR PWIFILSLLG
101: LTPLAERVSF ITEQVAFYTG PTVGGLLNAT CGNVTELIIA IFALSSNKIA VVKYSLLGSI LSNLLLVLGT SLLCGGIANL KVEQKYDRRQ ADVNSLMLLL
201: GLLCYLLPML FKYSGASAAL TVDPSLHLSR ASSIVMLIAY VVYIVFQLWT HRQLFEAEDE GEDGEDGEEE QAVIGLWSGI AWLVGMTVFI AVLSEYVVDT
301: IEDASDSWGL SVSFLSIILL PIVGNAAEHA GAIIFAFKNK LDISLGVALG SATQIAMFVV PLCVIVAWIM GIDMDLNFNL LETGSLALAI IVTGFTLQDG
401: TSHYMKGLVL LLCYIVIGAC FFVQRTPFNN QADVTNITLK PTTNAVLSA

Best Arabidopsis Sequence Match ( AT2G38170.1 )
(BLAST)

001: MAGIVTEPWS VAENGNPSIT AKGSSRELRL GRTAHNMSSS SLRKKSDLRV IQKVPYKGLK DFLSNLQEVI LGTKLAILFP AIPAAIICTY CGVSQPWIFG
101: LSLLGLTPLA ERVSFLTEQL AFYTGPTLGG LLNATCGNAT ELIIAILALT NNKVAVVKYS LLGSILSNLL LVLGTSLFCG GIANIRREQR FDRKQADVNF
201: FLLLLGFLCH LLPLLVGYLK NGEASAAVLS DMQLSISRGF SIVMLISYIA YLVFQLWTHR QLFDAQEQED EYDDDVEQET AVISFWSGFA WLVGMTLVIA
301: LLSEYVVATI EEASDKWNLS VSFISIILLP IVGNAAEHAG AVIFAFKNKL DISLGVALGS ATQIGLFVVP LTIIVAWILG INMDLNFGPL ETGCLAVSII
401: ITAFTLQDGS SHYMKGLVLL LCYFIIAICF FVDKLPQKQN AIHLGHQAMN NVVTATGGGV FSS

Arabidopsis Description

CAX1AT2G38170 protein [Source:UniProtKB/TrEMBL;Acc:B9DFT4]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.