CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

nucleus 1
golgi 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09614	Soybean	golgi, peroxisome, plasma membrane	92.68	93.32
Solyc03g123790.2.1	Tomato	plasma membrane	71.17	81.2
GSMUA_Achr11P...	Banana	golgi, peroxisome, plasma membrane	74.83	76.76
Solyc12g055750.1.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	75.29	75.81
PGSC0003DMT400023736	Potato	golgi, peroxisome, plasma membrane	74.14	74.65
VIT_09s0018g01840.t01	Wine grape	plasma membrane	77.12	74.39
TraesCS4A01G156500.1	Wheat	cytosol, peroxisome, plasma membrane	72.77	73.61
TraesCS4D01G156900.2	Wheat	cytosol, peroxisome, plasma membrane	72.54	73.21
TraesCS4B01G161500.2	Wheat	cytosol, peroxisome, plasma membrane	72.31	73.15
KRH58038	Soybean	plasma membrane	50.11	72.76
GSMUA_Achr3P05680_001	Banana	plasma membrane	66.59	72.75
Os03t0397400-01	Rice	golgi, peroxisome, plasma membrane	71.85	71.85
Os04t0653200-01	Rice	golgi, peroxisome, plasma membrane	67.96	71.22
Zm00001d047242_P001	Maize	golgi, peroxisome, plasma membrane	70.94	71.1
Zm00001d029432_P002	Maize	golgi, peroxisome, plasma membrane	70.94	71.1
KXG27283	Sorghum	plastid	67.28	71.01
HORVU4Hr1G037210.1	Barley	vacuole	72.54	70.6
EER94732	Sorghum	cytosol, peroxisome, plasma membrane	71.4	70.11
Zm00001d002022_P010	Maize	plastid	66.82	69.69
Zm00001d026479_P006	Maize	plastid	67.51	68.76
TraesCS2D01G507000.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	65.9	68.74
TraesCS2B01G534600.1	Wheat	golgi, peroxisome, plastid, vacuole	65.9	68.74
TraesCS2A01G506200.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	65.68	68.5
KRH46490	Soybean	golgi, peroxisome, plasma membrane	66.59	67.99
HORVU2Hr1G112420.3	Barley	cytosol	66.13	65.24
KRG98412	Soybean	plasma membrane	65.45	63.13
KRH30353	Soybean	golgi, plasma membrane, vacuole	21.74	52.2
KRH38810	Soybean	extracellular, golgi, vacuole	28.38	50.41
KRH47395	Soybean	mitochondrion	24.49	48.42
VIT_14s0083g00390.t01	Wine grape	cytosol	16.93	46.54
KRH38323	Soybean	endoplasmic reticulum, extracellular, vacuole	6.86	45.45
KRG98293	Soybean	cytosol, peroxisome, plasma membrane	44.62	44.72
KRH00226	Soybean	plastid	43.48	42.32
KRH17032	Soybean	golgi, peroxisome, plasma membrane	42.56	42.08
KRH49368	Soybean	plastid	43.02	41.87
KRH72673	Soybean	golgi, peroxisome, plasma membrane	42.56	41.33
KRH65739	Soybean	plastid	41.65	40.81
KRH65744	Soybean	golgi, peroxisome, plasma membrane	42.11	40.8
KRH75989	Soybean	golgi, peroxisome, plasma membrane	42.33	40.57
KRH46489	Soybean	cytosol, peroxisome, plasma membrane	59.95	36.49
KRH32678	Soybean	mitochondrion, plasma membrane	14.42	28.51

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	EntrezGene:100806000	MapMan:24.2.9.1.1	EMBL:ACUP02008482	InterPro:CAX
InterPro:CaH_exchang	EnsemblPlantsGene:GLYMA_13G372100	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816
GO:GO:0008150	GO:GO:0008324	GO:GO:0009705	GO:GO:0015369	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	GO:GO:0070588	GO:GO:0098655	UniProt:I1M610	EnsemblPlants:KRH23701	ProteinID:KRH23701
ProteinID:KRH23701.1	InterPro:NaCa_Exmemb	PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF34	TIGRFAMs:TIGR00378
TIGRFAMs:TIGR00846	TMHMM:TMhelix	UniParc:UPI000233B972	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr13:+:45708306..45720470

Molecular Weight (calculated)

48072.5 Da

IEP (calculated)

4.761

GRAVY (calculated)

0.531

Length

437 amino acids

Sequence
(BLAST)

001: MMGSVLEDKI DRHSFHDHHD ADDTPLASSS SKVLQQLHSF DFEDTSVVDL RSSSIFNTTR ISRSIYVVLI KAKINLLLPF GPLAILLHYL TGHHGWVFFF
101: TLLGITPLAE RLGYATEQLA FYTGPTVGGL LNATFGNATE MIISIYALES NMIRVVQQSL LGSILSNMLL VLGCAFFTGG IVHYKKVQVF DKAAAVVNSG
201: LLLMAVMGIL FPAVLYFTHS EVHQGKSVLS LSRFSSCIML LAYASYLFFQ LRSQQNVYSP VDEEGDNGEN SDEEEEHELT QWEAIIWLAI LTAWVSILSG
301: YLVDAIQGAS ESLNMSVAFI SVILLPIVGN AAEHASAIMF AVKDKLDITI GVAIGSSTQI SMFVIPFCVV VGWCMGKEMD LNFQLFETAT LFITVLVVAF
401: MMQEGTSNYF KGLMLILCYL IVAASFFVHV DPKSGDD

Best Arabidopsis Sequence Match ( AT3G13320.1 )
(BLAST)

001: MSCCKVPVLI EAQVEMVSAN ELENKSLFRQ EEDATQTKEA SLMEQGSLST SFPQHTPKAP KNSVLNSIKI VIFCNKLNLL LPFGPLAILV HYMIDSKGWV
101: FLLTLVGITP LAERLGYATE QLACYTGPTV GGLLNATFGN VTELIISIFA LKNGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFYQKD QVFDKGIATV
201: NSGLLLMAVM GILFPAVLHY THSEVHAGSS ELALSRFSSC IMLIAYAAYL FFQLKSQSNS YSPLDEESNQ NEETSAEDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWNIP IAFISTILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG QQMDLNFQLF ETAMLFITVI
401: VVAFFLQEGS SNYFKGLMLI LCYLIVAASF FVHEDPHQDG I

Arabidopsis Description

CAX2Vacuolar cation/proton exchanger 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39254]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.