Factsheet for Solyc12g055750.1.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
vacuole 2
extracellular 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome, plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g123790.2.1	Tomato	plasma membrane	80.65	91.38
GSMUA_Achr11P...	Banana	golgi, peroxisome, plasma membrane	76.27	77.7
VIT_09s0018g01840.t01	Wine grape	plasma membrane	79.95	76.6
KRH23701	Soybean	golgi, peroxisome, plasma membrane	75.81	75.29
KRH09614	Soybean	golgi, peroxisome, plasma membrane	73.96	73.96
Os03t0397400-01	Rice	golgi, peroxisome, plasma membrane	74.42	73.91
TraesCS4A01G156500.1	Wheat	cytosol, peroxisome, plasma membrane	73.04	73.38
GSMUA_Achr3P05680_001	Banana	plasma membrane	67.51	73.25
TraesCS4D01G156900.2	Wheat	cytosol, peroxisome, plasma membrane	73.04	73.21
Zm00001d047242_P001	Maize	golgi, peroxisome, plasma membrane	73.27	72.94
TraesCS4B01G161500.2	Wheat	cytosol, peroxisome, plasma membrane	72.58	72.92
Zm00001d029432_P002	Maize	golgi, peroxisome, plasma membrane	72.35	72.02
KXG27283	Sorghum	plastid	68.2	71.5
EER94732	Sorghum	cytosol, peroxisome, plasma membrane	73.04	71.24
Os04t0653200-01	Rice	golgi, peroxisome, plasma membrane	68.2	70.98
HORVU4Hr1G037210.1	Barley	vacuole	73.04	70.6
Zm00001d002022_P010	Maize	plastid	67.28	69.69
TraesCS2B01G534600.1	Wheat	golgi, peroxisome, plastid, vacuole	67.05	69.45
TraesCS2D01G507000.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	67.05	69.45
Zm00001d026479_P006	Maize	plastid	68.2	69.0
TraesCS2A01G506200.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	66.59	68.97
Solyc12g011070.1.1	Tomato	plasma membrane	53.46	67.84
HORVU2Hr1G112420.3	Barley	cytosol	67.28	65.91
Solyc07g056110.2.1	Tomato	cytosol, peroxisome, plasma membrane	66.59	63.94
Solyc06g006110.2.1	Tomato	cytosol, peroxisome, plasma membrane	45.39	46.57
Solyc09g005260.2.1	Tomato	plastid	45.16	43.17
VIT_14s0083g00390.t01	Wine grape	cytosol	15.44	42.14
Solyc12g011080.1.1	Tomato	cytosol	7.37	37.65

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	InterPro:CAX	InterPro:CaH_exchang	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150	GO:GO:0008324	GO:GO:0009705
GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0070588	GO:GO:0098655
UniProt:K4DFQ6	InterPro:NaCa_Exmemb	PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF34	EnsemblPlantsGene:Solyc12g055750.1
EnsemblPlants:Solyc12g055750.1.1	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846	TMHMM:TMhelix	UniParc:UPI0002769B91	SEG:seg

Description

No Description!

Coordinates

chr12:-:61735489..61742933

Molecular Weight (calculated)

47892.7 Da

IEP (calculated)

5.533

GRAVY (calculated)

0.520

Length

434 amino acids

Sequence
(BLAST)

001: MGSVGDKLDI ESDEEISFSS SHATNKIESL HFESAHMASP RSFYSSRVLR KVHQISYFRS VYFVILKAKI NVLLPFGPLA ILLHYLTKKH EWVFFFSLVG
101: ITPLAERLGY ATEQLAFYTG PTVGGLLNAT FGNATEMIIS LYALNNGMMR VVKQSLLGSI LSNMLLVLGC AFFCGGIVHQ QKVQVFSKAT ALVNSGLLLM
201: AVMGLLFPAV LHFTHTEVHF GKSELALSRF SSCIMLVAYA SYLFFQLKSQ PNLYSSIDED RENNAENSDE EEAPEITQWE AIGWLAILTV WISVLSGYLV
301: DAIEGASDSM NMPVSFISVI LLPIVGNAAE HASAIMFAMK DKLDITLGVA IGSSTQISMF VIPFCVVVGW FMGKPMDLNF QLFETATLFI TVLVVAFMLQ
401: EGTSNYFKGL MLILCYLIVA ASFFVHVDPS KEGE

Best Arabidopsis Sequence Match ( AT1G55730.2 )
(BLAST)

001: MGCCKVPALI QAQVEMGLVN DVEHKSLFRR DTDSPERKAA SLMEQGSLSA SFRECSTKTP NNSVLQSFKI VILSNKLNLL LPFGPLAILL HYLTDNKGWI
101: FLLSLVGITP LAERLGYATE QLACYTGSTV GGLLNATFGN VTELIISIFA LKSGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFSQKE QVFDKGNAVV
201: NSGLLLMAVM GLLFPAVLHY THSEVHAGSS ELALSRFSSC IMLVAYAAYL FFQLKSQPSS YTPLTEETNQ NEETSDDDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWKIP ISFISVILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG AQMDLNFQLF ETATLFITVI
401: VVAFFLQEGT SNYFKGLMLI LCYLIVAASF FVHEDPHQDD I

Arabidopsis Description

CAX5Vacuolar cation/proton exchanger 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L783]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.