Factsheet for VIT_08s0007g02240.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

nucleus 1
golgi 1
vacuole 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400030772	Potato	plasma membrane, plastid	75.0	73.68
KRH38810	Soybean	extracellular, golgi, vacuole	40.4	73.58
Solyc09g005260.2.1	Tomato	plastid	73.88	72.91
KRH65744	Soybean	golgi, peroxisome, plasma membrane	72.99	72.51
KRH49368	Soybean	plastid	71.88	71.71
KRH00226	Soybean	plastid	71.65	71.49
CDY29050	Canola	golgi, plasma membrane, plastid	67.41	71.06
KRH65739	Soybean	plastid	70.54	70.85
KRH75989	Soybean	golgi, peroxisome, plasma membrane	72.1	70.83
VIT_06s0004g06570.t01	Wine grape	cytosol, peroxisome, plasma membrane	70.31	70.63
Bra012833.1-P	Field mustard	golgi, plasma membrane, plastid	66.52	70.12
GSMUA_Achr4P06590_001	Banana	cytosol, golgi, peroxisome	57.14	69.19
CDY18402	Canola	plasma membrane	71.65	69.03
CDX93324	Canola	plasma membrane	71.65	69.03
CDX91434	Canola	plasma membrane	71.65	69.03
CDX74903	Canola	golgi, peroxisome, plasma membrane, plastid	71.65	69.03
Bra017134.1-P	Field mustard	plasma membrane	71.65	69.03
Bra005131.1-P	Field mustard	plasma membrane	71.65	69.03
CDX90630	Canola	golgi, peroxisome, plasma membrane, plastid	70.31	68.48
GSMUA_Achr3P29210_001	Banana	golgi, peroxisome, plasma membrane	68.97	67.47
TraesCS2A01G444600.1	Wheat	plasma membrane	65.18	67.13
HORVU2Hr1G102840.16	Barley	endoplasmic reticulum, plasma membrane	66.29	65.27
Os01t0557500-01	Rice	vacuole	65.62	65.19
TraesCS2D01G443700.2	Wheat	plasma membrane	63.84	64.71
AT2G38170.3	Thale cress	plasma membrane, plastid	68.53	64.63
TraesCS3A01G202800.1	Wheat	plastid	66.29	64.29
AT3G51860.2	Thale cress	plastid	66.74	63.89
TraesCS3D01G206400.1	Wheat	plastid	65.85	63.85
TraesCS2B01G465600.1	Wheat	plastid	65.18	63.48
OQU86993	Sorghum	plasma membrane	43.08	62.26
Os05t0594200-01	Rice	plastid	62.72	62.03
Zm00001d044533_P003	Maize	golgi, mitochondrion, peroxisome, plasma membrane, plastid	63.39	61.47
HORVU3Hr1G049060.8	Barley	endoplasmic reticulum, peroxisome, plasma membrane, plastid	62.5	59.07
GSMUA_Achr8P19620_001	Banana	plasma membrane	54.46	58.8
KXG22713	Sorghum	plasma membrane	64.73	57.77
Zm00001d009763_P001	Maize	cytosol, mitochondrion, plasma membrane, plastid	64.51	56.01
Os02t0314300-00	Rice	cytosol, peroxisome, vacuole	53.35	53.11
EES04904	Sorghum	cytosol, peroxisome, vacuole	49.78	48.69
Zm00001d009397_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	10.27	47.92
VIT_19s0015g01320.t01	Wine grape	cytosol, peroxisome, vacuole	43.75	43.95
VIT_09s0018g01840.t01	Wine grape	plasma membrane	43.3	42.83
VIT_14s0083g00390.t01	Wine grape	cytosol	10.04	28.3
VIT_12s0057g01500.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	43.75	17.77

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	EntrezGene:100240763	wikigene:100240763	MapMan:24.2.9.1.1	InterPro:CAX
ProteinID:CCB55495	ProteinID:CCB55495.1	InterPro:CaH_exchang	UniProt:F6HKS5	EMBL:FN595991	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150	GO:GO:0008324	GO:GO:0009705
GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0070588	GO:GO:0098655
EntrezGene:LOC100240763	wikigene:LOC100240763	InterPro:NaCa_Exmemb	PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF1
TIGR:TC51787	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846	TMHMM:TMhelix	UniParc:UPI0002108808	ArrayExpress:VIT_08s0007g02240
EnsemblPlantsGene:VIT_08s0007g02240	EnsemblPlants:VIT_08s0007g02240.t01	unigene:Vvi.2316	RefSeq:XP_002274791	RefSeq:XP_002274791.2	RefSeq:XP_010654156.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:-:16261364..16265961

Molecular Weight (calculated)

48131.5 Da

IEP (calculated)

5.965

GRAVY (calculated)

0.634

Length

448 amino acids

Sequence
(BLAST)

001: MASQEPWQME NGNLKGSSKE IKHGRTAHNM SSSSLRKKSD LSLVNKVPCG LVRQLLANLQ EVILGTKLSV LFPAIPLAIV AQYYGFAGPW IFGLSLLGLT
101: PLAERLGFLT EQIAYYTGPT VGGLLNATCG NATELIIAIF ALSKNKILVV KYSLLGSVLS NLLLVLGTSL FCGGIYNLRE EQKYDRKQSD INSLLLLLGL
201: LCHMLPLMFR YAANPSGAAL IADSTLSLSR AGSIVMLVAY LAYLVFQLWT HRKLFEAPED GDDDTVSSDE EPVIGFWSSV VWLILMTAII ALLSEFVVGT
301: IEVASESWGI SVSFISIILL PIVGNAAEHA GAVIFAFKNK LDISLGVALG SATQIAMFVV PLCVLVAWIM GIRMDLDFSL LETSSLALAI IVTAFTLQDG
401: SSHYMKGLVL LLCYVVIGAC FFVSKTTPDQ GNGITPGIKL PTEGVVSA

Best Arabidopsis Sequence Match ( AT3G51860.1 )
(BLAST)

001: MGSIVEPWAA IAENGNANVT AKGSSRELRH GRTAHNMSSS SLRKKSDLRL VQKVPCKTLK NILSNLQEVI LGTKLTLLFL AIPLAILANS YNYGRPLIFG
101: LSLIGLTPLA ERVSFLTEQL AFYTGPTVGG LLNATCGNAT ELIIAILALA NNKVAVVKYS LLGSILSNLL LVLGTSLFFG GIANIRREQR FDRKQADVNF
201: FLLLMGLLCH LLPLLLKYAA TGEVSTSMIN KMSLTLSRTS SIVMLIAYIA YLIFQLWTHR QLFEAQQDDD DAYDDEVSVE ETPVIGFWSG FAWLVGMTIV
301: IALLSEYVVD TIEDASDSWG LSVSFISIIL LPIVGNAAEH AGAIIFAFKN KLDISLGVAL GSATQISLFV VPLSVIVAWI LGIKMDLNFN ILETSSLALA
401: IIITAFTLQD GTSHYMKGLV LLLCYVIIAA CFFVDQIPQP NDLDVGLQPM NNLGEVFSA

Arabidopsis Description

CAX3Cation exchanger 3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.