Factsheet for VIT_06s0004g06570.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
plasma membrane 1
vacuole 1
mitochondrion 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30353	Soybean	golgi, plasma membrane, vacuole	32.06	78.57
Solyc06g006110.2.1	Tomato	cytosol, peroxisome, plasma membrane	67.04	70.69
VIT_08s0007g02240.t01	Wine grape	golgi, peroxisome, plasma membrane	70.63	70.31
PGSC0003DMT400010643	Potato	plasma membrane	67.04	70.19
KRH17032	Soybean	golgi, peroxisome, plasma membrane	69.51	70.14
KRG98293	Soybean	cytosol, peroxisome, plasma membrane	68.39	69.95
KRH38323	Soybean	endoplasmic reticulum, extracellular, vacuole	10.31	69.7
KRH72673	Soybean	golgi, peroxisome, plasma membrane	69.51	68.89
GSMUA_Achr3P29210_001	Banana	golgi, peroxisome, plasma membrane	69.28	67.47
GSMUA_Achr4P06590_001	Banana	cytosol, golgi, peroxisome	55.16	66.49
TraesCS2A01G444600.1	Wheat	plasma membrane	64.13	65.75
HORVU2Hr1G102840.16	Barley	endoplasmic reticulum, plasma membrane	64.57	63.3
TraesCS2D01G443700.2	Wheat	plasma membrane	62.56	63.12
TraesCS3A01G202800.1	Wheat	plastid	65.25	62.99
TraesCS3D01G206400.1	Wheat	plastid	64.57	62.34
Os01t0557500-01	Rice	vacuole	63.0	62.31
TraesCS2B01G465600.1	Wheat	plastid	63.9	61.96
OQU86993	Sorghum	plasma membrane	42.83	61.61
Zm00001d044533_P003	Maize	golgi, mitochondrion, peroxisome, plasma membrane, plastid	62.56	60.39
Os05t0594200-01	Rice	plastid	59.19	58.28
GSMUA_Achr8P19620_001	Banana	plasma membrane	54.04	58.07
HORVU3Hr1G049060.8	Barley	endoplasmic reticulum, peroxisome, plasma membrane, plastid	59.87	56.33
KXG22713	Sorghum	plasma membrane	62.33	55.38
Os02t0314300-00	Rice	cytosol, peroxisome, vacuole	54.93	54.44
Zm00001d009763_P001	Maize	cytosol, mitochondrion, plasma membrane, plastid	62.11	53.68
EES04904	Sorghum	cytosol, peroxisome, vacuole	53.14	51.75
Zm00001d009397_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	10.76	50.0
VIT_19s0015g01320.t01	Wine grape	cytosol, peroxisome, vacuole	42.38	42.38
VIT_09s0018g01840.t01	Wine grape	plasma membrane	41.7	41.06
VIT_14s0083g00390.t01	Wine grape	cytosol	9.19	25.79
VIT_12s0057g01500.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	44.17	17.86

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	EntrezGene:100243275	wikigene:100243275	MapMan:24.2.9.1.1	InterPro:CAX
ProteinID:CBI15957	ProteinID:CBI15957.3	InterPro:CaH_exchang	UniProt:D7SJY1	EMBL:FN594951	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150	GO:GO:0008324	GO:GO:0009705
GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0070588	GO:GO:0098655
EntrezGene:LOC100243275	wikigene:LOC100243275	InterPro:NaCa_Exmemb	PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF9
TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846	TMHMM:TMhelix	UniParc:UPI0001BE0CB7	ArrayExpress:VIT_06s0004g06570	EnsemblPlantsGene:VIT_06s0004g06570
EnsemblPlants:VIT_06s0004g06570.t01	unigene:Vvi.21412	RefSeq:XP_002279135	RefSeq:XP_002279135.2	RefSeq:XP_010650904.1	SEG:seg

Description

No Description!

Coordinates

chr6:-:7301237..7304391

Molecular Weight (calculated)

48756.2 Da

IEP (calculated)

6.981

GRAVY (calculated)

0.580

Length

446 amino acids

Sequence
(BLAST)

001: MDSQEVWNLE NGEVKGLSNK DGPHLIRNAH TMSSSSLRKR SDPMLLPKVR CRVLRQFLNN LQEVILGTKL CLLFPAIPLA VLAKCYQFGR PWIFALSLMG
101: LTPLAERVSF LTEQIAYFTG PTVGGLLNAT CGNATELIIA LFALHQKKIL VLKYSLLGSI LSNLLLVLGT SLLFGGLANL KKEQLYDRKQ ADVNSLLLLL
201: GLLCHVLPLM FKYAAWTDTF TAISTLQFSR ASSILMLTTY VAYLIFQLKT HRQLFESQEE DEDGDDEKAL IGFWSAFSWL VGMTVIIALL SEYVVGTIEA
301: ASDSWGVSVS FISIILLPIV GNAAEHAGSI IFAFKNKLDI SLGVALGSAT QISMFVVPLC VIVAWIMGVA MDLDFSLLET GSLAFAIIIT AFALQDGTSH
401: YMKGVVLSLC YIVIAACFFV HKNPSVHQST TDSLRVVQSS TGVLTA

Best Arabidopsis Sequence Match ( AT3G51860.1 )
(BLAST)

001: MGSIVEPWAA IAENGNANVT AKGSSRELRH GRTAHNMSSS SLRKKSDLRL VQKVPCKTLK NILSNLQEVI LGTKLTLLFL AIPLAILANS YNYGRPLIFG
101: LSLIGLTPLA ERVSFLTEQL AFYTGPTVGG LLNATCGNAT ELIIAILALA NNKVAVVKYS LLGSILSNLL LVLGTSLFFG GIANIRREQR FDRKQADVNF
201: FLLLMGLLCH LLPLLLKYAA TGEVSTSMIN KMSLTLSRTS SIVMLIAYIA YLIFQLWTHR QLFEAQQDDD DAYDDEVSVE ETPVIGFWSG FAWLVGMTIV
301: IALLSEYVVD TIEDASDSWG LSVSFISIIL LPIVGNAAEH AGAIIFAFKN KLDISLGVAL GSATQISLFV VPLSVIVAWI LGIKMDLNFN ILETSSLALA
401: IIITAFTLQD GTSHYMKGLV LLLCYVIIAA CFFVDQIPQP NDLDVGLQPM NNLGEVFSA

Arabidopsis Description

CAX3Cation exchanger 3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.