Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • plasma membrane 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:plasma membrane
PProwler:plastid
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017134.1-P Field mustard plasma membrane 99.35 99.35
CDY18402 Canola plasma membrane 99.14 99.14
CDX74903 Canola golgi, peroxisome, plasma membrane, plastid 95.91 95.91
CDX91434 Canola plasma membrane 95.27 95.27
AT2G38170.3 Thale cress plasma membrane, plastid 85.16 83.37
CDY29050 Canola golgi, plasma membrane, plastid 73.76 80.71
CDX90630 Canola golgi, peroxisome, plasma membrane, plastid 77.2 78.04
KRH38810 Soybean extracellular, golgi, vacuole 38.06 71.95
KRH00226 Soybean plastid 69.25 71.71
VIT_08s0007g02240.t01 Wine grape golgi, peroxisome, plasma membrane 69.03 71.65
KRH65744 Soybean golgi, peroxisome, plasma membrane 69.03 71.18
KRH75989 Soybean golgi, peroxisome, plasma membrane 69.68 71.05
KRH49368 Soybean plastid 68.39 70.82
Solyc09g005260.2.1 Tomato plastid 69.03 70.7
PGSC0003DMT400030772 Potato plasma membrane, plastid 69.25 70.61
KRH65739 Soybean plastid 66.45 69.28
GSMUA_Achr3P29210_001 Banana golgi, peroxisome, plasma membrane 63.44 64.41
GSMUA_Achr4P06590_001 Banana cytosol, golgi, peroxisome 50.32 63.24
TraesCS2A01G444600.1 Wheat plasma membrane 58.28 62.3
Os01t0557500-01 Rice vacuole 59.14 60.98
TraesCS2D01G443700.2 Wheat plasma membrane 57.63 60.63
TraesCS3D01G206400.1 Wheat plastid 60.22 60.61
HORVU2Hr1G102840.16 Barley endoplasmic reticulum, plasma membrane 59.14 60.44
OQU86993 Sorghum plasma membrane 40.22 60.32
TraesCS3A01G202800.1 Wheat plastid 59.78 60.17
Zm00001d044533_P003 Maize golgi, mitochondrion, peroxisome, plasma membrane, plastid 58.92 59.31
TraesCS2B01G465600.1 Wheat plastid 58.28 58.91
Os05t0594200-01 Rice plastid 56.77 58.28
GSMUA_Achr8P19620_001 Banana plasma membrane 50.97 57.11
HORVU3Hr1G049060.8 Barley endoplasmic reticulum, peroxisome, plasma membrane, plastid 56.56 55.49
CDY40303 Canola plastid 56.56 53.89
KXG22713 Sorghum plasma membrane 58.06 53.78
CDY10497 Canola plastid 43.66 52.45
Zm00001d009763_P001 Maize cytosol, mitochondrion, plasma membrane, plastid 58.06 52.33
Os02t0314300-00 Rice cytosol, peroxisome, vacuole 49.89 51.56
EES04904 Sorghum cytosol, peroxisome, vacuole 48.39 49.13
Zm00001d009397_P001 Maize endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 9.89 47.92
CDY42379 Canola plasma membrane 41.51 46.96
CDY10539 Canola plasma membrane 40.65 45.99
CDY23589 Canola golgi, peroxisome, plasma membrane 41.51 45.41
CDY24195 Canola golgi, peroxisome, plasma membrane 41.94 44.42
CDY44007 Canola cytosol, peroxisome, plasma membrane 41.51 43.86
CDY43356 Canola golgi, peroxisome, plasma membrane 41.51 43.67
CDY26090 Canola plasma membrane 40.22 42.4
CDX75703 Canola peroxisome 41.94 42.39
CDX82545 Canola mitochondrion 41.94 39.0
Protein Annotations
Gene3D:1.20.1420.30Gene3D:1.20.58.1130MapMan:24.2.9.1.1GO:A0A078DY08InterPro:CAXEnsemblPlants:CDX93324
ProteinID:CDX93324ProteinID:CDX93324.1InterPro:CaH_exchangGO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006812GO:GO:0006816GO:GO:0008150GO:GO:0008324GO:GO:0015369
GO:GO:0016020GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00155299001InterPro:NaCa_ExmembPFAM:PF01699
PANTHER:PTHR31503PANTHER:PTHR31503:SF33TIGRFAMs:TIGR00378TIGRFAMs:TIGR00846TMHMM:TMhelixUniParc:UPI0004EBF37A
SEG:seg:::::
Description
BnaC04g45720D
Coordinates
chrLK031875:+:1029908..1033888
Molecular Weight (calculated)
50401.9 Da
IEP (calculated)
5.584
GRAVY (calculated)
0.578
Length
465 amino acids
Sequence
(BLAST)
001: MAGIVQEQWS AAENGNATMT TKGSSRELRH GGRTAHSMSS SSLRKKSDLR VIQKVPYKGL KDFLSNLQEV ILGTKLAILF PAIPAAIIGT YCGFSQPWIF
101: GLSLLGLTPL AERVSFLTEQ LAFYTGPTLG GLLNATCGNA TELIIAILAL TNHKVAVVKY SLLGSILSNL LLVLGTSLFC GGIANLRREQ RFDRKQADVN
201: FFLLLMGLLC HLLPMLFGYV GNGETSADLI ADMSLNLSRA SSIVMLISYI AYLVFQLWTH RQLFDAQDQE DEFDDNVEEE TAVIGFWSGF VWLVGMTLVI
301: ALLSEYVVAT IEEASESWGL SVSFISIILL PIVGNAAEHA GAIIFAFKNK LDISLGVALG SATQIGLFVV PLTIIVAWIL GINMDLNFNL LETGSLALSI
401: IITAFTLQDG TSHYMKGLVL LLCYIIIAIC FFVDKLPQKQ PNAIHLGHQL MNNVAAAVGE GVFSS
Best Arabidopsis Sequence Match ( AT2G38170.1 )
(BLAST)
001: MAGIVTEPWS VAENGNPSIT AKGSSRELRL GRTAHNMSSS SLRKKSDLRV IQKVPYKGLK DFLSNLQEVI LGTKLAILFP AIPAAIICTY CGVSQPWIFG
101: LSLLGLTPLA ERVSFLTEQL AFYTGPTLGG LLNATCGNAT ELIIAILALT NNKVAVVKYS LLGSILSNLL LVLGTSLFCG GIANIRREQR FDRKQADVNF
201: FLLLLGFLCH LLPLLVGYLK NGEASAAVLS DMQLSISRGF SIVMLISYIA YLVFQLWTHR QLFDAQEQED EYDDDVEQET AVISFWSGFA WLVGMTLVIA
301: LLSEYVVATI EEASDKWNLS VSFISIILLP IVGNAAEHAG AVIFAFKNKL DISLGVALGS ATQIGLFVVP LTIIVAWILG INMDLNFGPL ETGCLAVSII
401: ITAFTLQDGS SHYMKGLVLL LCYFIIAICF FVDKLPQKQN AIHLGHQAMN NVVTATGGGV FSS
Arabidopsis Description
CAX1AT2G38170 protein [Source:UniProtKB/TrEMBL;Acc:B9DFT4]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.