Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44007 | Canola | cytosol, peroxisome, plasma membrane | 99.06 | 95.68 |
| CDY24195 | Canola | golgi, peroxisome, plasma membrane | 92.94 | 89.98 |
| AT3G13320.1 | Thale cress | golgi, peroxisome, vacuole | 92.71 | 89.34 |
| CDY43356 | Canola | golgi, peroxisome, plasma membrane | 92.0 | 88.46 |
| CDX75703 | Canola | peroxisome | 94.12 | 86.96 |
| CDY42379 | Canola | plasma membrane | 78.82 | 81.51 |
| CDY10539 | Canola | plasma membrane | 77.88 | 80.54 |
| CDX82545 | Canola | mitochondrion | 94.59 | 80.4 |
| CDY26090 | Canola | plasma membrane | 79.53 | 76.64 |
| KRH58038 | Soybean | plasma membrane | 52.94 | 74.75 |
| KRH46490 | Soybean | golgi, peroxisome, plasma membrane | 68.94 | 68.46 |
| VIT_19s0015g01320.t01 | Wine grape | cytosol, peroxisome, vacuole | 71.06 | 67.71 |
| GSMUA_Achr5P05070_001 | Banana | cytosol, peroxisome, plasma membrane | 71.29 | 67.04 |
| Os02t0138900-01 | Rice | golgi, plasma membrane | 39.53 | 66.93 |
| KRG98412 | Soybean | plasma membrane | 67.53 | 63.36 |
| GSMUA_Achr3P05320_001 | Banana | cytosol, peroxisome, plasma membrane | 65.65 | 60.78 |
| EES06255 | Sorghum | golgi, peroxisome, plasma membrane | 60.0 | 59.44 |
| TraesCS6B01G137200.1 | Wheat | mitochondrion | 61.41 | 56.99 |
| TraesCS6D01G096900.1 | Wheat | mitochondrion | 61.41 | 56.99 |
| TraesCS6A01G108700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, peroxisome | 61.65 | 53.69 |
| KRH47395 | Soybean | mitochondrion | 24.47 | 47.06 |
| CDY29050 | Canola | golgi, plasma membrane, plastid | 46.12 | 46.12 |
| CDX90630 | Canola | golgi, peroxisome, plasma membrane, plastid | 47.29 | 43.7 |
| Zm00001d015225_P001 | Maize | cytosol, endoplasmic reticulum, plasma membrane | 47.53 | 41.82 |
| CDY18402 | Canola | plasma membrane | 45.41 | 41.51 |
| CDX93324 | Canola | plasma membrane | 45.41 | 41.51 |
| CDX74903 | Canola | golgi, peroxisome, plasma membrane, plastid | 45.41 | 41.51 |
| CDX91434 | Canola | plasma membrane | 45.18 | 41.29 |
| CDY40303 | Canola | plastid | 44.24 | 38.52 |
| KRH46489 | Soybean | cytosol, peroxisome, plasma membrane | 62.82 | 37.19 |
| CDY10497 | Canola | plastid | 32.94 | 36.18 |
Protein Annotations
| Gene3D:1.20.1420.30 | Gene3D:1.20.58.1130 | MapMan:24.2.9.1.1 | GO:A0A078GE57 | UniProt:A0A078GE57 | InterPro:CAX |
| EnsemblPlants:CDY23589 | ProteinID:CDY23589 | ProteinID:CDY23589.1 | InterPro:CaH_exchang | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0006816 | GO:GO:0008150 | GO:GO:0008324 |
| GO:GO:0015369 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | GO:GO:0070588 | GO:GO:0098655 |
| EnsemblPlantsGene:GSBRNA2T00023791001 | InterPro:NaCa_Exmemb | PFAM:PF01699 | PANTHER:PTHR31503 | PANTHER:PTHR31503:SF34 | TIGRFAMs:TIGR00378 |
| TIGRFAMs:TIGR00846 | TMHMM:TMhelix | UniParc:UPI0004EEBFCF | SEG:seg | : | : |
Description
BnaC05g40050DBnaC05g40050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GE57]
Coordinates
chrLK032145:+:222983..225036
Molecular Weight (calculated)
46589.3 Da
IEP (calculated)
4.527
GRAVY (calculated)
0.593
Length
425 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSVNELEHK SLFRKEEEDA TQAKAASLME QGSLSLSFPE HATKSPKNSV LRSIKIVIFS NKLNMLLPFG PLAILVHYMI DSKGWVFLLS LIGITPLAER
101: LGYATEQLAF YTGPTVGGLL NATFGNVTEL IISIFALKNG MIRVVQLTLL GSILSNMLLV LGCAFFCGGL VFYQKDQVFD KGIAVVNSGL LLMAVMGILF
201: PAVLHYTHSE VHAGSSEMAL SRFSSCIMLI AYAAYLFFQL KSQSNSYSPL EEETNENEET CGEDEDPEIS KWEAIIWLSI LTAWVSLLSG YLVDAIEGAS
301: VSWNIPIAFI SVILLPIVGN AAEHAGAIMF AMKDKLDLSL GVAIGSSIQI SMFVVPFCVV IGWMMGEQMD LNFQLFETAM LFITVIVVAF FLQEGTSNYF
401: KGLMLILCYL IVAASFFVHE DPHEG
101: LGYATEQLAF YTGPTVGGLL NATFGNVTEL IISIFALKNG MIRVVQLTLL GSILSNMLLV LGCAFFCGGL VFYQKDQVFD KGIAVVNSGL LLMAVMGILF
201: PAVLHYTHSE VHAGSSEMAL SRFSSCIMLI AYAAYLFFQL KSQSNSYSPL EEETNENEET CGEDEDPEIS KWEAIIWLSI LTAWVSLLSG YLVDAIEGAS
301: VSWNIPIAFI SVILLPIVGN AAEHAGAIMF AMKDKLDLSL GVAIGSSIQI SMFVVPFCVV IGWMMGEQMD LNFQLFETAM LFITVIVVAF FLQEGTSNYF
401: KGLMLILCYL IVAASFFVHE DPHEG
001: MYMELYLMFS NFFKSIRWCK VPAFMQAKVE MGLVNEVELK SLLEQETDSP QTNAASLMEQ GSLRERRAKA PRNSVVQSFK IVILSNKLNL LLPFGPLAIL
101: VHYLTDNKGW FFLLSLVGIT PLAERLGYAT EQLSCYTGAT VGGLLNATFG NVIELIISII ALKNGMIRVV QLTLLGSILS NILLVLGCAF FCGGLVFPGK
201: DQVFDKRNAV VSSGMLLMAV MGLLFPTFLH YTHSEVHAGS SELALSRFIS CIMLVAYAAY LFFQLKSQPS FYTEKTNQNE ETSNDDEDPE ISKWEAIIWL
301: SIFTAWVSLL SGYLVDAIEG TSVSWKIPIS FISVILLPIV GNAAEHAGAI MFAMKDKLDL SLGVAIGSSI QISMFAVPFC VVIGWMMGAQ MDLNLQLFET
401: ATLLITVIVV AFFLQLEGTS NYFKRLMLIL CYLIVAASFF VHEDPHQGTD HQQICTCRTP SYTYEIL
101: VHYLTDNKGW FFLLSLVGIT PLAERLGYAT EQLSCYTGAT VGGLLNATFG NVIELIISII ALKNGMIRVV QLTLLGSILS NILLVLGCAF FCGGLVFPGK
201: DQVFDKRNAV VSSGMLLMAV MGLLFPTFLH YTHSEVHAGS SELALSRFIS CIMLVAYAAY LFFQLKSQPS FYTEKTNQNE ETSNDDEDPE ISKWEAIIWL
301: SIFTAWVSLL SGYLVDAIEG TSVSWKIPIS FISVILLPIV GNAAEHAGAI MFAMKDKLDL SLGVAIGSSI QISMFAVPFC VVIGWMMGAQ MDLNLQLFET
401: ATLLITVIVV AFFLQLEGTS NYFKRLMLIL CYLIVAASFF VHEDPHQGTD HQQICTCRTP SYTYEIL
Arabidopsis Description
ATCAX6cation exchanger 6 [Source:TAIR;Acc:AT1G55720]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.