Factsheet for Zm00001d015225_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13320.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT3G13320.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT3G13320.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT3G13320.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT3G13320.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT3G13320.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT3G13320.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT3G13320.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT3G13320.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT3G13320.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT3G13320.1	Zm00001d005003_P002	AT2G41100.1	17360592
AT3G13320.1	Zm00001d008278_P001	AT2G41100.1	17360592
AT3G13320.1	Zm00001d010649_P001	AT2G41100.1	17360592
AT3G13320.1	Zm00001d028948_P001	AT2G41100.1	17360592
AT3G13320.1	Zm00001d038543_P004	AT2G41100.1	17360592
AT3G13320.1	Zm00001d038545_P001	AT2G41100.1	17360592
AT3G13320.1	Zm00001d041430_P001	AT2G41100.1	17360592
AT3G13320.1	Zm00001d043144_P001	AT2G41100.1	17360592
AT3G13320.1	Zm00001d047597_P001	AT2G41100.1	17360592
AT3G13320.1	Zm00001d052415_P001	AT2G41100.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0138900-01	Rice	golgi, plasma membrane	33.75	64.94
EES06255	Sorghum	golgi, peroxisome, plasma membrane	56.94	64.1
KRH58038	Soybean	plasma membrane	35.82	57.48
Solyc12g011070.1.1	Tomato	plasma membrane	38.72	54.68
TraesCS6D01G096900.1	Wheat	mitochondrion	47.0	49.56
TraesCS6B01G137200.1	Wheat	mitochondrion	46.79	49.34
PGSC0003DMT400079826	Potato	cytosol, peroxisome, plasma membrane	43.06	47.6
CDY23589	Canola	golgi, peroxisome, plasma membrane	41.82	47.53
TraesCS6A01G108700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, peroxisome	47.83	47.34
AT1G55730.2	Thale cress	plasma membrane	42.86	46.94
GSMUA_Achr5P05070_001	Banana	cytosol, peroxisome, plasma membrane	43.89	46.9
KRH46490	Soybean	golgi, peroxisome, plasma membrane	41.41	46.73
Bra030840.1-P	Field mustard	plasma membrane	39.75	46.72
CDY42379	Canola	plasma membrane	39.54	46.47
Zm00001d029432_P002	Maize	golgi, peroxisome, plasma membrane	41.82	46.33
Zm00001d002022_P010	Maize	plastid	40.17	46.3
AT3G13320.1	Thale cress	golgi, peroxisome, vacuole	42.24	46.26
CDY10539	Canola	plasma membrane	39.34	46.23
VIT_19s0015g01320.t01	Wine grape	cytosol, peroxisome, vacuole	42.65	46.19
CDY44007	Canola	cytosol, peroxisome, plasma membrane	42.03	46.14
Zm00001d047242_P001	Maize	golgi, peroxisome, plasma membrane	41.61	46.1
Bra034690.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.03	46.03
CDY24195	Canola	golgi, peroxisome, plasma membrane	41.82	46.01
CDY43356	Canola	golgi, peroxisome, plasma membrane	42.03	45.93
CDX75703	Canola	peroxisome	43.69	45.87
Solyc07g056110.2.1	Tomato	cytosol, peroxisome, plasma membrane	42.86	45.8
Zm00001d026479_P006	Maize	plastid	40.17	45.22
CDY26090	Canola	plasma membrane	40.99	44.9
KRG98412	Soybean	plasma membrane	41.82	44.59
GSMUA_Achr3P05320_001	Banana	cytosol, peroxisome, plasma membrane	41.41	43.57
Bra039385.1-P	Field mustard	plasma membrane	41.61	42.58
Bra001499.1-P	Field mustard	mitochondrion	43.48	42.25
CDX82545	Canola	mitochondrion	43.69	42.2
PGSC0003DMT400020114	Potato	cytosol, peroxisome, plasma membrane	39.75	42.2
AT1G55720.1	Thale cress	plasma membrane	40.37	41.76
Zm00001d009397_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	6.63	33.33
Zm00001d044533_P003	Maize	golgi, mitochondrion, peroxisome, plasma membrane, plastid	29.61	30.95
Zm00001d009763_P001	Maize	cytosol, mitochondrion, plasma membrane, plastid	29.4	27.52
KRH46489	Soybean	cytosol, peroxisome, plasma membrane	39.54	26.6
KRH47395	Soybean	mitochondrion	11.8	25.79
VIT_12s0057g01500.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	45.96	20.13

Protein Annotations

EnsemblPlants:Zm00001d015225_P001	EnsemblPlants:Zm00001d015225_T001	EnsemblPlantsGene:Zm00001d015225	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:NaCa_Exmemb	PANTHER:PTHR31503	PANTHER:PTHR31503:SF34
PFAM:PF01699	ProteinID:AQK68349.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000844040E	UniProt:A0A1D6H079
MapMan:24.2.9.1.1	:	:	:	:	:

Description

Vacuolar cation/proton exchanger 2

Coordinates

chr5:+:80063827..80067249

Molecular Weight (calculated)

52293.3 Da

IEP (calculated)

5.272

GRAVY (calculated)

0.299

Length

483 amino acids

Sequence
(BLAST)

001: MRTALVPRQW SEFPEESKLC RFVVGRVREP EGRAAQIQAQ FAYTVWVLGG PGGLSQPEQA GGLLNATFGN ATELVISIHA LRSGKLRVVQ QSLLGSILSN
101: TLLVLGCAFF GGGLTCGRTE QIDTDPSSSS SLLVVVRRWQ EDAVLNSGLL LMAVMGLVSP AMLYYTHTEA NLGESALALS RFSSCVMLFA YAAFVFFELS
201: NSRRRDESTE ASRPGACLRS CRQGGGGGGG GGDQADDDCE YAFPEITKWE AIAWLAIFTA WISVFSDFLV GAIEVYISVM RRMVLFLGTF CSSQFLADTS
301: CGADTLRAVL QGAAKAWKIP VAFISTVLLP IDLSLGVAIG SSTQISMFVI PFSVVAGWMM GQPMDLNFHL FETASLLITV LVVALLLQDG TSNCFKGLML
401: ILCYLIVAAS FYVYADPNID GRCLASSKLA PSMMGWDYTS SSPKKPLRRG QEELLRFTEE ENRSGWPIQH SSPEGAIQAH PLL

Best Arabidopsis Sequence Match ( AT1G55720.1 )
(BLAST)

001: MYMELYLMFS NFFKSIRWCK VPAFMQAKVE MGLVNEVELK SLLEQETDSP QTNAASLMEQ GSLRERRAKA PRNSVVQSFK IVILSNKLNL LLPFGPLAIL
101: VHYLTDNKGW FFLLSLVGIT PLAERLGYAT EQLSCYTGAT VGGLLNATFG NVIELIISII ALKNGMIRVV QLTLLGSILS NILLVLGCAF FCGGLVFPGK
201: DQVFDKRNAV VSSGMLLMAV MGLLFPTFLH YTHSEVHAGS SELALSRFIS CIMLVAYAAY LFFQLKSQPS FYTEKTNQNE ETSNDDEDPE ISKWEAIIWL
301: SIFTAWVSLL SGYLVDAIEG TSVSWKIPIS FISVILLPIV GNAAEHAGAI MFAMKDKLDL SLGVAIGSSI QISMFAVPFC VVIGWMMGAQ MDLNLQLFET
401: ATLLITVIVV AFFLQLEGTS NYFKRLMLIL CYLIVAASFF VHEDPHQGTD HQQICTCRTP SYTYEIL

Arabidopsis Description

ATCAX6cation exchanger 6 [Source:TAIR;Acc:AT1G55720]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.