Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23589 | Canola | golgi, peroxisome, plasma membrane | 89.34 | 92.71 |
| CDY44007 | Canola | cytosol, peroxisome, plasma membrane | 91.84 | 92.05 |
| Bra034690.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 91.61 | 91.61 |
| CDY24195 | Canola | golgi, peroxisome, plasma membrane | 90.93 | 91.34 |
| CDY43356 | Canola | golgi, peroxisome, plasma membrane | 90.7 | 90.5 |
| AT1G55730.2 | Thale cress | plasma membrane | 86.85 | 86.85 |
| CDX75703 | Canola | peroxisome | 90.48 | 86.74 |
| Bra039385.1-P | Field mustard | plasma membrane | 90.25 | 84.32 |
| Bra001499.1-P | Field mustard | mitochondrion | 90.48 | 80.28 |
| CDX82545 | Canola | mitochondrion | 90.7 | 80.0 |
| AT1G55720.1 | Thale cress | plasma membrane | 81.41 | 76.87 |
| KRH58038 | Soybean | plasma membrane | 50.79 | 74.42 |
| VIT_19s0015g01320.t01 | Wine grape | cytosol, peroxisome, vacuole | 69.16 | 68.39 |
| KRH46490 | Soybean | golgi, peroxisome, plasma membrane | 65.76 | 67.76 |
| GSMUA_Achr5P05070_001 | Banana | cytosol, peroxisome, plasma membrane | 68.48 | 66.81 |
| Os02t0138900-01 | Rice | golgi, plasma membrane | 37.64 | 66.14 |
| KRG98412 | Soybean | plasma membrane | 65.53 | 63.8 |
| EES06255 | Sorghum | golgi, peroxisome, plasma membrane | 58.5 | 60.14 |
| GSMUA_Achr3P05320_001 | Banana | cytosol, peroxisome, plasma membrane | 62.36 | 59.91 |
| TraesCS6D01G096900.1 | Wheat | mitochondrion | 59.86 | 57.64 |
| TraesCS6B01G137200.1 | Wheat | mitochondrion | 59.41 | 57.21 |
| TraesCS6A01G108700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, peroxisome | 59.64 | 53.89 |
| KRH47395 | Soybean | mitochondrion | 22.9 | 45.7 |
| Zm00001d015225_P001 | Maize | cytosol, endoplasmic reticulum, plasma membrane | 46.26 | 42.24 |
| AT5G01490.1 | Thale cress | plastid | 41.04 | 39.87 |
| AT2G38170.3 | Thale cress | plasma membrane, plastid | 42.63 | 39.58 |
| AT3G51860.2 | Thale cress | plastid | 41.5 | 39.1 |
| KRH46489 | Soybean | cytosol, peroxisome, plasma membrane | 60.54 | 37.19 |
Protein Annotations
| Gene3D:1.20.1420.30 | Gene3D:1.20.58.1130 | MapMan:24.2.9.1.1 | EntrezGene:820532 | UniProt:A0A178VHU2 | ProteinID:AEE75333.1 |
| EMBL:AF424628 | ArrayExpress:AT3G13320 | EnsemblPlantsGene:AT3G13320 | RefSeq:AT3G13320 | TAIR:AT3G13320 | RefSeq:AT3G13320-TAIR-G |
| EnsemblPlants:AT3G13320.1 | TAIR:AT3G13320.1 | EMBL:AY097343 | Unigene:At.47534 | ProteinID:BAB02801.1 | InterPro:CAX |
| Symbol:CAX2 | InterPro:CaH_exchang | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 | GO:GO:0006811 |
| GO:GO:0006812 | GO:GO:0006816 | GO:GO:0008150 | GO:GO:0008324 | GO:GO:0009705 | GO:GO:0015297 |
| GO:GO:0015369 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | GO:GO:0070588 | GO:GO:0098655 |
| RefSeq:NP_566452.1 | InterPro:NaCa_Exmemb | ProteinID:OAP05071.1 | PFAM:PF01699 | PO:PO:0000013 | PO:PO:0000034 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0020144 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR31503 | PANTHER:PTHR31503:SF34 | UniProt:Q39254 | TIGRFAMs:TIGR00378 | TIGRFAMs:TIGR00846 |
| TMHMM:TMhelix | EMBL:U57412 | UniParc:UPI00000A04AF | : | : | : |
Description
CAX2Vacuolar cation/proton exchanger 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39254]
Coordinates
chr3:+:4314505..4318487
Molecular Weight (calculated)
48218.2 Da
IEP (calculated)
4.447
GRAVY (calculated)
0.573
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCCKVPVLI EAQVEMVSAN ELENKSLFRQ EEDATQTKEA SLMEQGSLST SFPQHTPKAP KNSVLNSIKI VIFCNKLNLL LPFGPLAILV HYMIDSKGWV
101: FLLTLVGITP LAERLGYATE QLACYTGPTV GGLLNATFGN VTELIISIFA LKNGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFYQKD QVFDKGIATV
201: NSGLLLMAVM GILFPAVLHY THSEVHAGSS ELALSRFSSC IMLIAYAAYL FFQLKSQSNS YSPLDEESNQ NEETSAEDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWNIP IAFISTILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG QQMDLNFQLF ETAMLFITVI
401: VVAFFLQEGS SNYFKGLMLI LCYLIVAASF FVHEDPHQDG I
101: FLLTLVGITP LAERLGYATE QLACYTGPTV GGLLNATFGN VTELIISIFA LKNGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFYQKD QVFDKGIATV
201: NSGLLLMAVM GILFPAVLHY THSEVHAGSS ELALSRFSSC IMLIAYAAYL FFQLKSQSNS YSPLDEESNQ NEETSAEDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWNIP IAFISTILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG QQMDLNFQLF ETAMLFITVI
401: VVAFFLQEGS SNYFKGLMLI LCYLIVAASF FVHEDPHQDG I
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.