Factsheet for PGSC0003DMT400079826

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g056110.2.1	Tomato	cytosol, peroxisome, plasma membrane	97.71	94.47
PGSC0003DMT400020114	Potato	cytosol, peroxisome, plasma membrane	76.43	73.41
PGSC0003DMT400023736	Potato	golgi, peroxisome, plasma membrane	66.59	67.05
GSMUA_Achr5P05070_001	Banana	cytosol, peroxisome, plasma membrane	69.11	66.81
Os02t0138900-01	Rice	golgi, plasma membrane	38.22	66.53
EES06255	Sorghum	golgi, peroxisome, plasma membrane	59.04	60.14
GSMUA_Achr3P05320_001	Banana	cytosol, peroxisome, plasma membrane	63.16	60.13
TraesCS6B01G137200.1	Wheat	mitochondrion	61.78	58.95
TraesCS6D01G096900.1	Wheat	mitochondrion	61.33	58.52
TraesCS6A01G108700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, peroxisome	61.78	55.33
PGSC0003DMT400010643	Potato	plasma membrane	44.62	45.77
Zm00001d015225_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	47.6	43.06
PGSC0003DMT400030772	Potato	plasma membrane, plastid	44.85	42.98
VIT_12s0057g01500.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	73.46	29.1

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	InterPro:CAX	InterPro:CaH_exchang	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150
GO:GO:0008324	GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0070588
GO:GO:0098655	UniProt:M1D2I2	InterPro:NaCa_Exmemb	PFAM:PF01699	EnsemblPlantsGene:PGSC0003DMG400031085	PGSC:PGSC0003DMG400031085
EnsemblPlants:PGSC0003DMT400079826	PANTHER:PTHR31503	PANTHER:PTHR31503:SF34	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846	TMHMM:TMhelix
UniParc:UPI000295B3AC	SEG:seg	:	:	:	:

Description

Vacuolar cation/proton exchanger [Source:PGSC_GENE;Acc:PGSC0003DMG400031085]

Coordinates

chr7:+:51466772..51472975

Molecular Weight (calculated)

47832.8 Da

IEP (calculated)

4.700

GRAVY (calculated)

0.534

Length

437 amino acids

Sequence
(BLAST)

001: MGSLEGRAVL QLEDENLVDS KHNDRRTSSM DATPQISVFD TDTDGVSCKC MWNSILRQMH IVLFSKKLNL LIPCGPLAML VDTLTDHHGW IFFLSLLGII
101: PLAERLGWAT EQLAFYTGPT VGGLLNATFG NATELIISMY ALRRGMIRVV QQSLLGSILS NTLLVLGCAF FAGGIVHSTK DQLFDKGNAV MNSGLLLMAV
201: MGLLFPAVLH FTHTELHFGK SELALSRFSS CVMLVAYGAY LFYQLTSQNS LYMPLAEEEG ENDESLEEEE APEISKWGSI IWLSILTLWI AVLSEYLVNA
301: IEGASVAMSI PVAFISVILL PIVGNAAEHA GAVMFAVKDK LDISLGVAIG SSTQIAMFGI PFCVVVGWIM GRPMDLNFQL FETATLFMSV LVVAFMLQDG
401: TSNYFKGLML LLCYLIVAAS FFVHIDPEAI QDKPKKT

Best Arabidopsis Sequence Match ( AT1G55730.2 )
(BLAST)

001: MGCCKVPALI QAQVEMGLVN DVEHKSLFRR DTDSPERKAA SLMEQGSLSA SFRECSTKTP NNSVLQSFKI VILSNKLNLL LPFGPLAILL HYLTDNKGWI
101: FLLSLVGITP LAERLGYATE QLACYTGSTV GGLLNATFGN VTELIISIFA LKSGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFSQKE QVFDKGNAVV
201: NSGLLLMAVM GLLFPAVLHY THSEVHAGSS ELALSRFSSC IMLVAYAAYL FFQLKSQPSS YTPLTEETNQ NEETSDDDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWKIP ISFISVILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG AQMDLNFQLF ETATLFITVI
401: VVAFFLQEGT SNYFKGLMLI LCYLIVAASF FVHEDPHQDD I

Arabidopsis Description

CAX5Vacuolar cation/proton exchanger 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L783]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.