Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU78227 | Sorghum | cytosol | 85.21 | 67.6 |
| Os05t0491000-01 | Rice | cytosol | 69.72 | 63.87 |
| TraesCS1D01G308000.1 | Wheat | cytosol | 66.9 | 63.33 |
| HORVU0Hr1G001280.1 | Barley | cytosol | 66.2 | 62.25 |
| TraesCS1B01G319300.1 | Wheat | cytosol | 64.79 | 61.33 |
| TraesCS1A01G308700.1 | Wheat | cytosol | 65.49 | 61.18 |
| Zm00001d008278_P001 | Maize | cytosol | 42.25 | 47.24 |
| PGSC0003DMT400046278 | Potato | cytosol | 25.35 | 46.75 |
| PGSC0003DMT400054299 | Potato | cytosol | 36.62 | 46.02 |
| Bra025438.1-P | Field mustard | cytosol | 35.21 | 44.25 |
| KRH18664 | Soybean | cytosol | 41.55 | 42.14 |
| Bra020155.1-P | Field mustard | cytosol | 42.96 | 40.94 |
| Solyc11g072240.1.1 | Tomato | cytosol | 42.96 | 40.94 |
| VIT_08s0040g00470.t01 | Wine grape | cytosol | 42.96 | 40.94 |
| CDY04474 | Canola | cytosol | 42.96 | 40.94 |
| Solyc10g081170.1.1 | Tomato | extracellular | 42.96 | 40.94 |
| CDY56411 | Canola | cytosol | 42.96 | 40.94 |
| Solyc10g077010.1.1 | Tomato | cytosol | 42.96 | 40.94 |
| Solyc12g099990.1.1 | Tomato | nucleus | 42.96 | 40.94 |
| KRG94975 | Soybean | nucleus | 42.96 | 40.94 |
| Zm00001d038545_P001 | Maize | cytosol, mitochondrion | 42.96 | 40.94 |
| Bra019453.1-P | Field mustard | cytosol | 42.96 | 40.94 |
| PGSC0003DMT400018569 | Potato | cytosol | 42.96 | 40.94 |
| Bra012037.1-P | Field mustard | cytosol | 42.96 | 40.94 |
| Bra006595.1-P | Field mustard | cytosol | 42.96 | 40.94 |
| PGSC0003DMT400058435 | Potato | cytosol | 42.96 | 40.94 |
| Bra002368.1-P | Field mustard | cytosol | 42.96 | 40.94 |
| PGSC0003DMT400070437 | Potato | cytosol | 42.96 | 40.94 |
| Solyc01g008950.2.1 | Tomato | nucleus | 42.96 | 40.94 |
| CDY12321 | Canola | cytosol | 41.55 | 40.69 |
| Bra034981.1-P | Field mustard | cytosol | 41.55 | 40.69 |
| VIT_06s0009g01910.t01 | Wine grape | cytosol | 43.66 | 40.52 |
| AT5G21274.1 | Thale cress | cytosol | 42.25 | 40.27 |
| Bra000214.1-P | Field mustard | cytosol | 42.25 | 40.27 |
| Bra003251.1-P | Field mustard | cytosol | 42.25 | 40.27 |
| Bra014671.1-P | Field mustard | cytosol | 42.25 | 40.27 |
| AT3G56800.1 | Thale cress | cytosol | 42.25 | 40.27 |
| CDY65072 | Canola | cytosol | 42.25 | 40.27 |
| PGSC0003DMT400014123 | Potato | mitochondrion | 34.51 | 40.16 |
| Zm00001d047597_P001 | Maize | cytosol | 41.55 | 40.14 |
| CDY55678 | Canola | cytosol | 41.55 | 39.6 |
| Bra007269.1-P | Field mustard | cytosol | 41.55 | 39.6 |
| CDX92401 | Canola | cytosol | 37.32 | 39.55 |
| CDX96148 | Canola | cytosol | 40.85 | 38.93 |
| Bra004166.1-P | Field mustard | cytosol | 40.85 | 38.93 |
| CDX99690 | Canola | cytosol | 40.85 | 38.93 |
| CDY27651 | Canola | cytosol | 40.14 | 38.0 |
| AT2G41110.2 | Thale cress | cytosol | 42.25 | 37.27 |
| AT1G66410.2 | Thale cress | cytosol | 40.85 | 36.48 |
| Zm00001d038543_P004 | Maize | plastid | 42.25 | 35.5 |
| CDX75970 | Canola | cytosol | 27.46 | 34.21 |
| Zm00001d052415_P001 | Maize | cytosol | 38.03 | 34.18 |
| CDY48191 | Canola | cytosol | 42.96 | 34.08 |
| Bra034317.1-P | Field mustard | cytosol | 42.96 | 34.08 |
| KRG89812 | Soybean | cytosol, mitochondrion | 39.44 | 33.94 |
| CDX77060 | Canola | cytosol | 42.96 | 33.89 |
| PGSC0003DMT400097662 | Potato | cytosol, mitochondrion | 40.85 | 33.53 |
| AT2G27030.3 | Thale cress | cytosol | 42.25 | 33.15 |
| AT5G37780.3 | Thale cress | cytosol | 40.85 | 33.14 |
| Zm00001d041430_P001 | Maize | cytosol | 38.03 | 31.95 |
| Zm00001d005003_P002 | Maize | cytosol | 40.14 | 31.67 |
| Zm00001d043144_P001 | Maize | plasma membrane | 39.44 | 30.6 |
| Zm00001d028948_P001 | Maize | cytosol | 42.25 | 30.46 |
| CDY30947 | Canola | cytosol | 44.37 | 30.14 |
| AT3G43810.2 | Thale cress | cytosol | 43.66 | 28.97 |
| CDY57144 | Canola | cytosol | 28.87 | 28.08 |
| CDY21220 | Canola | cytosol | 43.66 | 28.05 |
| Zm00001d033980_P001 | Maize | cytosol | 30.99 | 28.03 |
| Zm00001d035095_P001 | Maize | cytosol, extracellular, mitochondrion | 25.35 | 24.32 |
| Zm00001d049665_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 25.35 | 24.32 |
| Zm00001d039110_P001 | Maize | cytosol | 28.87 | 23.84 |
| Zm00001d053188_P001 | Maize | cytosol | 17.61 | 22.94 |
| Zm00001d022160_P003 | Maize | cytosol, mitochondrion | 26.76 | 22.09 |
| AT2G41090.1 | Thale cress | cytosol | 27.46 | 20.42 |
| Zm00001d014271_P001 | Maize | cytosol | 23.94 | 18.99 |
| Zm00001d044411_P001 | Maize | plastid | 25.35 | 15.38 |
| AT2G41100.1 | Thale cress | cytosol | 30.28 | 13.27 |
Protein Annotations
| EnsemblPlants:Zm00001d010649_P001 | EnsemblPlants:Zm00001d010649_T001 | EnsemblPlantsGene:Zm00001d010649 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF256 |
| PFAM:PF13833 | PFscan:PS50222 | ProteinID:AQK94548.1 | SEG:seg | SUPFAM:SSF47473 | UniParc:UPI0008447B65 |
| UniProt:A0A1D6FSL1 | MapMan:35.1 | : | : | : | : |
Description
Probable calcium-binding protein CML20
Coordinates
chr8:-:122943984..122944412
Molecular Weight (calculated)
15246.2 Da
IEP (calculated)
4.863
GRAVY (calculated)
-0.140
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MCVRASLLLP AGGLAGRIAT GELVTALRSL GQNVDEAEAR RFLEDAGVAA GAGDIDLAAF LAVAARKMGA RQSEARLAEC FDVFDDACSG SIPAEQLRQV
101: MVSHGDRLTE EEADAMLREA DPRGEGRVEY KHYVKVLLRD KK
101: MVSHGDRLTE EEADAMLREA DPRGEGRVEY KHYVKVLLRD KK
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMAK
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMAK
Arabidopsis Description
CAM7Calmodulin 7 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.