Factsheet for Zm00001d044728_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
peroxisome 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome, plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	plastid

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d013039_P001
Zm00001d028948_P001
Zm00001d034543_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d050302_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G37670.1	Zm00001d013039_P001	AT1G03130.1	21798944
AT5G37670.1	Zm00001d034543_P001	AT1G03130.1	21798944
AT5G37670.1	Zm00001d050302_P001	AT1G13520.1	21798944
AT5G37670.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT5G37670.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT5G37670.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT5G37670.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT5G37670.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT5G37670.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT5G37670.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT5G37670.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT5G37670.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT5G37670.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT5G37670.1	Zm00001d013039_P001	AT4G02770.1	21798944
AT5G37670.1	Zm00001d034543_P001	AT4G02770.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89539	Sorghum	mitochondrion	89.73	88.51
TraesCS7D01G205400.1	Wheat	nucleus	73.29	77.54
TraesCS7A01G202200.1	Wheat	mitochondrion, peroxisome	72.6	76.81
TraesCS7B01G109100.1	Wheat	mitochondrion, peroxisome	71.92	76.09
Os06t0253100-01	Rice	mitochondrion	70.55	70.55
HORVU0Hr1G020420.1	Barley	plastid	72.6	61.99
GSMUA_Achr9P27260_001	Banana	peroxisome	56.85	57.24
AT5G37670.1	Thale cress	cytosol	45.21	48.18
KRH17351	Soybean	mitochondrion	46.58	47.22
Bra028141.1-P	Field mustard	cytosol	44.52	46.76
CDY60723	Canola	cytosol	44.52	46.76
CDY01718	Canola	cytosol	44.52	46.76
KRH72979	Soybean	cytosol, mitochondrion, peroxisome	45.89	46.53
VIT_13s0019g00860.t01	Wine grape	cytosol	45.21	46.48
Solyc04g014480.2.1	Tomato	mitochondrion	45.21	45.52
PGSC0003DMT400060736	Potato	mitochondrion	44.52	44.83
Zm00001d028555_P001	Maize	extracellular, plasma membrane	41.1	37.97
Zm00001d028557_P001	Maize	mitochondrion	41.1	37.97
Zm00001d039936_P001	Maize	cytosol	38.36	36.84
Zm00001d008577_P001	Maize	cytosol	39.04	36.77
Zm00001d039933_P001	Maize	plasma membrane	38.36	36.36
Zm00001d047841_P001	Maize	cytosol	39.73	35.58
Zm00001d039942_P001	Maize	cytosol	35.62	34.9
Zm00001d028561_P001	Maize	cytosol	37.67	34.59
Zm00001d007271_P001	Maize	cytosol, endoplasmic reticulum	36.3	28.34
Zm00001d053965_P001	Maize	mitochondrion, plastid	34.25	27.17
Zm00001d039941_P001	Maize	cytosol	28.08	24.7
Zm00001d025508_P001	Maize	extracellular	31.51	21.2
Zm00001d003554_P001	Maize	endoplasmic reticulum, golgi	30.14	21.15

Protein Annotations

MapMan:19.1.8.10	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	ProteinID:AQL00739.1	GO:GO:0000302	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0005782	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	InterPro:HSP20
InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	UniProt:K7VQ98	PFAM:PF00011	PFscan:PS01031
PANTHER:PTHR11527	PANTHER:PTHR11527:SF142	SUPFAM:SSF49764	UniParc:UPI0002219B2B	EnsemblPlantsGene:Zm00001d044728	EnsemblPlants:Zm00001d044728_P001
EnsemblPlants:Zm00001d044728_T001	SEG:seg	:	:	:	:

Description

Class I heat shock protein 3

Coordinates

chr9:-:593529..593969

Molecular Weight (calculated)

15846.9 Da

IEP (calculated)

9.156

GRAVY (calculated)

-0.260

Length

146 amino acids

Sequence
(BLAST)

001: MSDFFFGSPF RRLFHARPFH AVDWSSAAAA AMDWVETPSS HVLRVNVPGL GKDDVKVQVD EGKVLTIRGA PPAAKEKGKE DEEEGTVWHV AERGKPEFAR
101: AVALPENVRV DGIRAGLENG VLTVVVPKEV APARPKPRSI AVSSKL

Best Arabidopsis Sequence Match ( AT5G37670.1 )
(BLAST)

001: MADRGIFLYP FRRFQEWSRS TALIDWMESN NSHIFKINVP GYNKEDIKVQ IEEGNVLSIR GEGIKEEKKE NLVWHVAERE AFSGGGSEFL RRIELPENVK
101: VDQVKAYVEN GVLTVVVPKD TSSKSSKVRN VNITSKL

Arabidopsis Description

HSP15.715.7 kDa heat shock protein, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q9FHQ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.