Factsheet for Zm00001d025508_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26390	Sorghum	endoplasmic reticulum, extracellular, golgi	88.48	88.89
Zm00001d003554_P001	Maize	endoplasmic reticulum, golgi	84.79	88.46
Os04t0445100-01	Rice	nucleus, plastid	71.89	72.56
TraesCS2A01G312900.1	Wheat	endoplasmic reticulum, golgi	70.97	70.32
TraesCS2D01G311400.1	Wheat	endoplasmic reticulum, golgi	69.59	68.95
HORVU2Hr1G077710.2	Barley	endoplasmic reticulum, golgi	68.2	64.63
GSMUA_Achr8P29100_001	Banana	endoplasmic reticulum	52.07	56.5
KRG92477	Soybean	endoplasmic reticulum	46.54	52.6
CDX86006	Canola	extracellular	40.09	50.58
KRH34328	Soybean	endoplasmic reticulum	45.16	50.26
KRH09251	Soybean	endoplasmic reticulum	45.62	50.25
VIT_18s0089g01270.t01	Wine grape	endoplasmic reticulum	42.86	50.0
CDY05088	Canola	cytosol	45.16	49.75
CDX93767	Canola	endoplasmic reticulum, extracellular, golgi	39.17	49.42
Bra027999.1-P	Field mustard	extracellular	39.17	49.42
Zm00001d007271_P001	Maize	cytosol, endoplasmic reticulum	42.4	49.2
CDX90748	Canola	extracellular	44.24	48.73
Bra000703.1-P	Field mustard	extracellular	44.24	48.73
AT4G10250.1	Thale cress	endoplasmic reticulum	42.4	47.18
Zm00001d039942_P001	Maize	cytosol	32.26	46.98
Solyc11g020330.1.1	Tomato	plastid	39.63	45.26
KRG90262	Soybean	endoplasmic reticulum	40.09	44.62
Zm00001d028555_P001	Maize	extracellular, plasma membrane	31.8	43.67
Zm00001d028557_P001	Maize	mitochondrion	31.8	43.67
Zm00001d028561_P001	Maize	cytosol	31.8	43.4
Zm00001d008577_P001	Maize	cytosol	30.88	43.23
PGSC0003DMT400023932	Potato	endoplasmic reticulum	38.71	42.64
Zm00001d039933_P001	Maize	plasma membrane	29.95	42.21
Zm00001d039936_P001	Maize	cytosol	29.49	42.11
Zm00001d047841_P001	Maize	cytosol	29.49	39.26
Zm00001d053965_P001	Maize	mitochondrion, plastid	28.57	33.7
Zm00001d044728_P001	Maize	mitochondrion	21.2	31.51
Zm00001d039941_P001	Maize	cytosol	22.12	28.92

Protein Annotations

EnsemblPlants:Zm00001d025508_P001	EnsemblPlants:Zm00001d025508_T001	EnsemblPlantsGene:Zm00001d025508	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20
InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF135	PFAM:PF00011
PFscan:PS01031	ProteinID:AQK43884.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49764	TMHMM:TMhelix
UniParc:UPI0001D62E28	UniProt:K7TTJ0	MapMan:19.1.8.12	:	:	:

Description

Class IV heat shock protein

Coordinates

chr10:+:120809943..120810596

Molecular Weight (calculated)

23438.7 Da

IEP (calculated)

6.519

GRAVY (calculated)

-0.411

Length

217 amino acids

Sequence
(BLAST)

001: MSRRAAAALA LACLAVMAAA LADGALLPWF GEGRRGGDEA AAAAASPLSG PGVGLLADPF RILEHVPLGF DRDDVAMVSM ARADWRETPD AHEIVVDVPG
101: MRREDLKIEV EDYSRVLRVS GERRRAEEHR GDHWHREERS HGRFWRQFRL PENADLDSVG ASLDNGVLTV RFRKLAPEQV KGPRVVGIAG GDGDGDAKKS
201: IGGGAGDGHH QTKKVEL

Best Arabidopsis Sequence Match ( AT4G10250.1 )
(BLAST)

001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL

Arabidopsis Description

HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.