Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 9
- vacuole 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34328 | Soybean | endoplasmic reticulum | 68.82 | 65.64 |
| KRG92477 | Soybean | endoplasmic reticulum | 67.74 | 65.62 |
| KRH09251 | Soybean | endoplasmic reticulum | 67.2 | 63.45 |
| CDX86006 | Canola | extracellular | 56.45 | 61.05 |
| CDX93767 | Canola | endoplasmic reticulum, extracellular, golgi | 56.45 | 61.05 |
| Bra027999.1-P | Field mustard | extracellular | 55.91 | 60.47 |
| AT4G10250.1 | Thale cress | endoplasmic reticulum | 61.83 | 58.97 |
| CDY05088 | Canola | cytosol | 61.29 | 57.87 |
| GSMUA_Achr8P29100_001 | Banana | endoplasmic reticulum | 61.83 | 57.5 |
| Bra000703.1-P | Field mustard | extracellular | 60.22 | 56.85 |
| CDX90748 | Canola | extracellular | 60.22 | 56.85 |
| KRG90262 | Soybean | endoplasmic reticulum | 58.6 | 55.9 |
| Solyc11g020330.1.1 | Tomato | plastid | 54.84 | 53.68 |
| PGSC0003DMT400023932 | Potato | endoplasmic reticulum | 55.38 | 52.28 |
| VIT_13s0019g03030.t01 | Wine grape | cytosol | 30.11 | 51.85 |
| VIT_13s0019g02900.t01 | Wine grape | cytosol | 29.57 | 50.93 |
| VIT_06s0004g05770.t01 | Wine grape | cytosol | 35.48 | 45.83 |
| Zm00001d003554_P001 | Maize | endoplasmic reticulum, golgi | 51.08 | 45.67 |
| VIT_13s0019g03090.t01 | Wine grape | cytosol | 39.25 | 45.62 |
| KXG26390 | Sorghum | endoplasmic reticulum, extracellular, golgi | 52.15 | 44.91 |
| VIT_13s0019g03000.t01 | Wine grape | cytosol | 38.17 | 44.38 |
| VIT_13s0019g02930.t01 | Wine grape | cytosol | 38.17 | 44.38 |
| VIT_13s0019g02920.t01 | Wine grape | cytosol | 32.26 | 44.12 |
| VIT_08s0058g00210.t01 | Wine grape | cytosol | 34.41 | 43.24 |
| VIT_13s0019g03010.t01 | Wine grape | cytosol, mitochondrion | 33.33 | 43.06 |
| Zm00001d025508_P001 | Maize | extracellular | 50.0 | 42.86 |
| VIT_13s0019g02760.t01 | Wine grape | cytosol | 32.26 | 42.86 |
| VIT_13s0019g03160.t01 | Wine grape | cytosol | 36.56 | 42.5 |
| TraesCS2A01G312900.1 | Wheat | endoplasmic reticulum, golgi | 50.0 | 42.47 |
| TraesCS2D01G311400.1 | Wheat | endoplasmic reticulum, golgi | 50.0 | 42.47 |
| VIT_13s0019g02740.t01 | Wine grape | cytosol | 34.41 | 42.38 |
| Os04t0445100-01 | Rice | nucleus, plastid | 48.92 | 42.33 |
| VIT_13s0019g02820.t01 | Wine grape | cytosol | 33.33 | 41.06 |
| VIT_13s0019g02770.t01 | Wine grape | cytosol | 33.33 | 41.06 |
| VIT_13s0019g02850.t01 | Wine grape | cytosol | 33.33 | 41.06 |
| VIT_13s0019g02840.t01 | Wine grape | cytosol | 33.33 | 41.06 |
| VIT_13s0019g02780.t01 | Wine grape | cytosol | 33.33 | 41.06 |
| VIT_13s0019g03170.t01 | Wine grape | cytosol | 34.95 | 40.88 |
| VIT_19s0085g01050.t01 | Wine grape | cytosol | 31.18 | 39.73 |
| HORVU2Hr1G077710.2 | Barley | endoplasmic reticulum, golgi | 47.85 | 38.86 |
| VIT_13s0019g03050.t01 | Wine grape | cytosol | 32.26 | 36.36 |
| VIT_18s0001g01570.t01 | Wine grape | mitochondrion | 31.72 | 36.2 |
| VIT_13s0019g00860.t01 | Wine grape | cytosol | 26.34 | 34.51 |
| VIT_12s0035g01910.t01 | Wine grape | cytosol | 43.55 | 32.4 |
| VIT_18s0001g01610.t01 | Wine grape | cytosol | 27.42 | 32.08 |
Protein Annotations
| EntrezGene:100263588 | wikigene:100263588 | MapMan:19.1.8.12 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | ProteinID:CCB44099 |
| ProteinID:CCB44099.1 | UniProt:F6GVW4 | EMBL:FN594956 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009628 |
| InterPro:HSP20 | InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | EntrezGene:LOC100263588 | wikigene:LOC100263588 |
| PFAM:PF00011 | PFscan:PS01031 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF135 | SUPFAM:SSF49764 | SignalP:SignalP-noTM |
| TIGR:TC63760 | TMHMM:TMhelix | UniParc:UPI00015CBA40 | ArrayExpress:VIT_18s0089g01270 | EnsemblPlantsGene:VIT_18s0089g01270 | EnsemblPlants:VIT_18s0089g01270.t01 |
| unigene:Vvi.1921 | RefSeq:XP_002263376 | RefSeq:XP_002263376.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr18:-:29188982..29189738
Molecular Weight (calculated)
21126.3 Da
IEP (calculated)
6.152
GRAVY (calculated)
-0.567
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHSLVSSLL LLLVFFLAAG STQGSLLDIW SDRFPDPFRV LEQIPLGLDR DADLAPSPAR VDWKETPEGH VIMMDIPGLR KEEVKIEVDE SQRVLRVSGE
101: RKKEEEKKGD HWHRMERSYG KFWRQFRLPN NVDLEGVKAK LENGVLTLSL PNLSSDRIKG PKVVSIAGGD EEENPKLKSE TSKQEL
101: RKKEEEKKGD HWHRMERSYG KFWRQFRLPN NVDLEGVKAK LENGVLTLSL PNLSSDRIKG PKVVSIAGGD EEENPKLKSE TSKQEL
001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL
Arabidopsis Description
HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.