CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93767	Canola	endoplasmic reticulum, extracellular, golgi	93.6	93.6
Bra027999.1-P	Field mustard	extracellular	91.86	91.86
CDY05088	Canola	cytosol	72.67	63.45
CDX90748	Canola	extracellular	70.93	61.93
KRH09251	Soybean	endoplasmic reticulum	65.7	57.36
KRH34328	Soybean	endoplasmic reticulum	64.53	56.92
VIT_18s0089g01270.t01	Wine grape	endoplasmic reticulum	61.05	56.45
KRG92477	Soybean	endoplasmic reticulum	62.79	56.25
KRG90262	Soybean	endoplasmic reticulum	58.72	51.79
GSMUA_Achr8P29100_001	Banana	endoplasmic reticulum	58.14	50.0
Solyc11g020330.1.1	Tomato	plastid	54.65	49.47
PGSC0003DMT400023932	Potato	endoplasmic reticulum	55.81	48.73
CDY51363	Canola	cytosol	38.37	43.42
CDY60563	Canola	cytosol	38.37	43.42
CDX97881	Canola	cytosol	38.37	43.14
CDY53372	Canola	cytosol, plastid	38.37	42.58
CDY56096	Canola	cytosol	37.21	42.11
Os04t0445100-01	Rice	nucleus, plastid	52.33	41.86
CDY45447	Canola	cytosol	38.37	41.51
KXG26390	Sorghum	endoplasmic reticulum, extracellular, golgi	51.74	41.2
Zm00001d003554_P001	Maize	endoplasmic reticulum, golgi	49.42	40.87
TraesCS2A01G312900.1	Wheat	endoplasmic reticulum, golgi	51.74	40.64
TraesCS2D01G311400.1	Wheat	endoplasmic reticulum, golgi	51.74	40.64
CDY45448	Canola	cytosol	36.63	40.38
CDX99119	Canola	cytosol	36.63	40.13
Zm00001d025508_P001	Maize	extracellular	50.58	40.09
CDY49575	Canola	plastid	37.21	40.0
CDX71079	Canola	cytosol	37.21	40.0
CDY53371	Canola	cytosol	36.05	39.74
CDX88719	Canola	cytosol	36.63	39.38
HORVU2Hr1G077710.2	Barley	endoplasmic reticulum, golgi	51.74	38.86
CDX86069	Canola	cytosol	34.88	38.22
CDY60723	Canola	cytosol	26.74	33.09
CDY01718	Canola	cytosol	26.74	33.09
CDY68135	Canola	cytosol	18.6	20.65

Protein Annotations

EnsemblPlants:CDX86006	EnsemblPlantsGene:GSBRNA2T00143917001	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone
InterPro:IPR002068	InterPro:IPR008978	ncoils:Coil	PANTHER:PTHR11527	PANTHER:PTHR11527:SF135	PFAM:PF00011
PFscan:PS01031	ProteinID:CDX86006	ProteinID:CDX86006.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49764
TMHMM:TMhelix	UniParc:UPI0004EE9F9C	MapMan:19.1.8.12	:	:	:

Description

BnaC06g21280D

Coordinates

chrLK031843:-:1766629..1767147

Molecular Weight (calculated)

19840.8 Da

IEP (calculated)

5.487

GRAVY (calculated)

-0.581

Length

172 amino acids

Sequence
(BLAST)

001: MKQFSLALLG ILLITLFLGN IKTTEGSLRD PFRVLEQIPL GLDRDQSVAL SPARVDWKET KEENVIRLDV PGMKKDEIKI EVEENRVVRI SGERKREEEK
101: EGDQWHRVER SYGKFWRQFR MPDNVDLDTI KAKLENGVLT ITINKLATDK VKGPRVVDIE FEEDQSGKFS SA

Best Arabidopsis Sequence Match ( AT4G10250.1 )
(BLAST)

001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL

Arabidopsis Description

HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.