Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51363 | Canola | cytosol | 97.39 | 98.03 |
| AT2G29500.1 | Thale cress | cytosol | 92.16 | 92.16 |
| CDY45448 | Canola | cytosol | 93.46 | 91.67 |
| CDY53371 | Canola | cytosol | 92.16 | 90.38 |
| Bra018383.1-P | Field mustard | cytosol | 91.5 | 89.74 |
| CDY53372 | Canola | cytosol, plastid | 84.97 | 83.87 |
| CDY45447 | Canola | cytosol | 84.97 | 81.76 |
| PGSC0003DMT400078008 | Potato | cytosol | 76.47 | 75.97 |
| KRH42102 | Soybean | cytosol | 75.82 | 75.82 |
| Solyc06g076540.1.1 | Tomato | cytosol, nucleus | 75.82 | 75.32 |
| Solyc06g076570.1.1 | Tomato | cytosol, extracellular, nucleus | 75.82 | 75.32 |
| KRH42105 | Soybean | cytosol | 75.16 | 75.16 |
| PGSC0003DMT400078202 | Potato | cytosol | 75.16 | 74.68 |
| PGSC0003DMT400078006 | Potato | cytosol | 75.16 | 74.68 |
| Solyc06g076560.1.1 | Tomato | cytosol, nucleus | 75.16 | 74.68 |
| KRH53964 | Soybean | cytosol | 73.2 | 74.67 |
| Solyc09g059210.1.1 | Tomato | cytosol, nucleus | 32.68 | 74.63 |
| KRH50105 | Soybean | cytosol | 74.51 | 74.51 |
| Solyc06g076520.1.1 | Tomato | cytosol, nucleus, plastid | 74.51 | 74.03 |
| PGSC0003DMT400078201 | Potato | cytosol | 74.51 | 74.03 |
| KRH20402 | Soybean | cytosol | 74.51 | 74.03 |
| KRH50107 | Soybean | cytosol | 73.86 | 73.86 |
| PGSC0003DMT400078007 | Potato | cytosol | 73.86 | 73.38 |
| KRH20397 | Soybean | cytosol | 73.86 | 73.38 |
| KRH42103 | Soybean | cytosol | 73.2 | 73.2 |
| KRH50104 | Soybean | endoplasmic reticulum | 76.47 | 72.67 |
| KRH50102 | Soybean | cytosol | 72.55 | 72.55 |
| PGSC0003DMT400038705 | Potato | cytosol | 62.75 | 72.18 |
| KRH20400 | Soybean | cytosol | 72.55 | 72.08 |
| KRH20403 | Soybean | cytosol | 75.82 | 72.05 |
| KRH50109 | Soybean | cytosol | 71.9 | 71.9 |
| KRH63973 | Soybean | cytosol | 65.36 | 70.92 |
| CDY60563 | Canola | cytosol | 69.28 | 69.74 |
| KRH20405 | Soybean | cytosol | 68.63 | 69.08 |
| CDY56096 | Canola | cytosol | 68.63 | 69.08 |
| KRH15020 | Soybean | cytosol | 70.59 | 67.92 |
| KRH57663 | Soybean | cytosol | 59.48 | 66.91 |
| CDX99119 | Canola | cytosol | 68.63 | 66.88 |
| Solyc07g045610.1.1 | Tomato | cytosol | 33.99 | 66.67 |
| CDX71079 | Canola | cytosol | 69.28 | 66.25 |
| CDX86069 | Canola | cytosol | 67.97 | 66.24 |
| CDX88719 | Canola | cytosol | 68.63 | 65.62 |
| CDY49575 | Canola | plastid | 67.97 | 65.0 |
| CDY60723 | Canola | cytosol | 41.18 | 45.32 |
| CDY01718 | Canola | cytosol | 39.87 | 43.88 |
| CDX93767 | Canola | endoplasmic reticulum, extracellular, golgi | 43.79 | 38.95 |
| CDX86006 | Canola | extracellular | 43.14 | 38.37 |
| CDX90748 | Canola | extracellular | 45.75 | 35.53 |
| CDY05088 | Canola | cytosol | 45.1 | 35.03 |
| CDY68135 | Canola | cytosol | 35.29 | 34.84 |
Protein Annotations
| EnsemblPlants:CDX97881 | EnsemblPlantsGene:GSBRNA2T00105217001 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 | InterPro:HSP20-like_chaperone |
| InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF190 | PFAM:PF00011 | PFscan:PS01031 |
| ProteinID:CDX97881 | ProteinID:CDX97881.1 | SEG:seg | SUPFAM:SSF49764 | UniParc:UPI0001D62DE9 | MapMan:19.1.8.1 |
Description
BnaC04g40580D
Coordinates
chrLK031901:+:1191774..1192235
Molecular Weight (calculated)
17464.6 Da
IEP (calculated)
6.817
GRAVY (calculated)
-0.697
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLIPSFFGN NRRGSNSFFD PFSLDVWDPL REFSSLSRDN SAIVNARVDW RETPEAHVFK ADLPGLKKEE VKVEIEEDSV LKISGERHVE KEDKNDTWHR
101: VERSSGQFTR KFRLPENVKM DQVKAAMENG VLTVTVPKAE TKKADVKSIQ ISG
101: VERSSGQFTR KFRLPENVKM DQVKAAMENG VLTVTVPKAE TKKADVKSIQ ISG
001: MSMIPSFFNN NRRSNIFDPF SLDVWDPFKE LTSSSLSREN SAIVNARVDW RETPEAHVFK ADLPGLKKEE VKVEIEEDSV LKISGERHVE KEDKNDTWHR
101: VERSSGQFTR RFRLPENVKM DQVKAAMENG VLTVTVPKAE TKKADVKSIQ ISG
101: VERSSGQFTR RFRLPENVKM DQVKAAMENG VLTVTVPKAE TKKADVKSIQ ISG
Arabidopsis Description
HSP17.6B17.6 kDa class I heat shock protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW31]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.