CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, extracellular

Predictor Summary:

plastid 1
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027999.1-P	Field mustard	extracellular	96.51	96.51
CDX86006	Canola	extracellular	93.6	93.6
CDY05088	Canola	cytosol	69.77	60.91
CDX90748	Canola	extracellular	69.19	60.41
KRH34328	Soybean	endoplasmic reticulum	65.7	57.95
KRH09251	Soybean	endoplasmic reticulum	65.7	57.36
KRG92477	Soybean	endoplasmic reticulum	63.95	57.29
VIT_18s0089g01270.t01	Wine grape	endoplasmic reticulum	61.05	56.45
KRG90262	Soybean	endoplasmic reticulum	58.14	51.28
Solyc11g020330.1.1	Tomato	plastid	55.81	50.53
PGSC0003DMT400023932	Potato	endoplasmic reticulum	56.98	49.75
GSMUA_Achr8P29100_001	Banana	endoplasmic reticulum	56.4	48.5
CDY60563	Canola	cytosol	39.53	44.74
CDY51363	Canola	cytosol	38.95	44.08
CDX97881	Canola	cytosol	38.95	43.79
CDY56096	Canola	cytosol	38.37	43.42
CDY53372	Canola	cytosol, plastid	38.95	43.23
CDY45447	Canola	cytosol	38.95	42.14
CDX71079	Canola	cytosol	38.37	41.25
CDY49575	Canola	plastid	38.37	41.25
CDY45448	Canola	cytosol	37.21	41.03
Os04t0445100-01	Rice	nucleus, plastid	51.16	40.93
CDX88719	Canola	cytosol	37.79	40.62
CDY53371	Canola	cytosol	36.63	40.38
CDX99119	Canola	cytosol	36.63	40.13
Zm00001d025508_P001	Maize	extracellular	49.42	39.17
Zm00001d003554_P001	Maize	endoplasmic reticulum, golgi	47.09	38.94
KXG26390	Sorghum	endoplasmic reticulum, extracellular, golgi	48.84	38.89
CDX86069	Canola	cytosol	35.47	38.85
TraesCS2A01G312900.1	Wheat	endoplasmic reticulum, golgi	49.42	38.81
TraesCS2D01G311400.1	Wheat	endoplasmic reticulum, golgi	49.42	38.81
HORVU2Hr1G077710.2	Barley	endoplasmic reticulum, golgi	49.42	37.12
CDY60723	Canola	cytosol	27.91	34.53
CDY01718	Canola	cytosol	27.91	34.53
CDY68135	Canola	cytosol	19.19	21.29

Protein Annotations

EnsemblPlants:CDX93767	EnsemblPlantsGene:GSBRNA2T00156503001	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone
InterPro:IPR002068	InterPro:IPR008978	ncoils:Coil	PANTHER:PTHR11527	PANTHER:PTHR11527:SF135	PFAM:PF00011
PFscan:PS01031	ProteinID:CDX93767	ProteinID:CDX93767.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49764
TMHMM:TMhelix	UniParc:UPI0004EEFE66	MapMan:19.1.8.12	:	:	:

Description

BnaA09g23670D

Coordinates

chrLK031877:+:573311..573829

Molecular Weight (calculated)

19955.9 Da

IEP (calculated)

5.456

GRAVY (calculated)

-0.634

Length

172 amino acids

Sequence
(BLAST)

001: MKQFSLALLG IFLITMFVGN IKTTEGSLRD PFRVLEQIPL GLDRDQSMAL SPARVDWKET QEEHVIRLDV PGMKKDEIKI EVEENRVVRI SGERKKEEEK
101: EGDQWHRVER SYGKFWRQFR MPDNVDLDTI KAKLENGVLT ITINKFSTDK VKGPRVVDIE FEEDQTGKFS SG

Best Arabidopsis Sequence Match ( AT4G10250.1 )
(BLAST)

001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL

Arabidopsis Description

HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.