Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003554_P001 | Maize | endoplasmic reticulum, golgi | 87.5 | 90.87 |
| Zm00001d025508_P001 | Maize | extracellular | 88.89 | 88.48 |
| TraesCS2A01G312900.1 | Wheat | endoplasmic reticulum, golgi | 76.39 | 75.34 |
| TraesCS2D01G311400.1 | Wheat | endoplasmic reticulum, golgi | 75.46 | 74.43 |
| Os04t0445100-01 | Rice | nucleus, plastid | 73.61 | 73.95 |
| HORVU2Hr1G077710.2 | Barley | endoplasmic reticulum, golgi | 73.61 | 69.43 |
| GSMUA_Achr8P29100_001 | Banana | endoplasmic reticulum | 55.09 | 59.5 |
| KRG92477 | Soybean | endoplasmic reticulum | 50.0 | 56.25 |
| KRH34328 | Soybean | endoplasmic reticulum | 48.61 | 53.85 |
| KRH09251 | Soybean | endoplasmic reticulum | 47.69 | 52.28 |
| VIT_18s0089g01270.t01 | Wine grape | endoplasmic reticulum | 44.91 | 52.15 |
| CDX86006 | Canola | extracellular | 41.2 | 51.74 |
| CDY05088 | Canola | cytosol | 46.76 | 51.27 |
| Bra000703.1-P | Field mustard | extracellular | 45.83 | 50.25 |
| CDX90748 | Canola | extracellular | 45.83 | 50.25 |
| Bra027999.1-P | Field mustard | extracellular | 39.35 | 49.42 |
| CDX93767 | Canola | endoplasmic reticulum, extracellular, golgi | 38.89 | 48.84 |
| AT4G10250.1 | Thale cress | endoplasmic reticulum | 43.98 | 48.72 |
| EES00359 | Sorghum | cytosol | 33.8 | 48.67 |
| Solyc11g020330.1.1 | Tomato | plastid | 42.13 | 47.89 |
| KRG90262 | Soybean | endoplasmic reticulum | 41.67 | 46.15 |
| EES02535 | Sorghum | cytosol | 31.94 | 46.0 |
| PGSC0003DMT400023932 | Potato | endoplasmic reticulum | 41.2 | 45.18 |
| EES00358 | Sorghum | cytosol | 31.48 | 45.03 |
| EER95120 | Sorghum | cytosol | 32.87 | 44.94 |
| EES02532 | Sorghum | cytosol | 31.48 | 44.74 |
| EER95124 | Sorghum | cytosol | 32.41 | 44.3 |
| EES02531 | Sorghum | cytosol | 31.02 | 44.08 |
| EES08263 | Sorghum | endoplasmic reticulum | 42.13 | 43.96 |
| KXG39718 | Sorghum | cytosol | 31.48 | 43.31 |
| EES04437 | Sorghum | mitochondrion | 28.7 | 33.88 |
| EER89539 | Sorghum | mitochondrion | 20.83 | 30.41 |
| EES02533 | Sorghum | cytosol | 22.22 | 29.09 |
Protein Annotations
| MapMan:19.1.8.12 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | UniProt:A0A1B6PL34 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009408 |
| GO:GO:0009628 | InterPro:HSP20 | InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | EnsemblPlants:KXG26390 |
| ProteinID:KXG26390 | ProteinID:KXG26390.1 | PFAM:PF00011 | PFscan:PS01031 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF135 |
| EnsemblPlantsGene:SORBI_3006G093500 | SUPFAM:SSF49764 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0003C6E1CB | SEG:seg |
Description
hypothetical protein
Coordinates
chr6:+:46339260..46343909
Molecular Weight (calculated)
23548.8 Da
IEP (calculated)
5.711
GRAVY (calculated)
-0.433
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRTAALAL ACLAVTTAAL ADGALLPWFG DGRRGGRDEA AAVSPLSDVG LLADPFRILE HVPFGFDRDD VAMVSMARVD WRETPDAHEI VVDVPGMRRE
101: DLKIEVEDNR VLRVSGERRR VEEQKGDHWH REERSYGRFW RQFRLPENAD LDSVAASLDN GVLTVRFRKL APEQIKGPRV VGIAGGDGDG GDAKKSIGAG
201: AGAGAGDDHQ TKKVEL
101: DLKIEVEDNR VLRVSGERRR VEEQKGDHWH REERSYGRFW RQFRLPENAD LDSVAASLDN GVLTVRFRKL APEQIKGPRV VGIAGGDGDG GDAKKSIGAG
201: AGAGAGDDHQ TKKVEL
001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL
Arabidopsis Description
HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.