Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G311400.1 | Wheat | endoplasmic reticulum, golgi | 95.89 | 95.89 |
| HORVU2Hr1G077710.2 | Barley | endoplasmic reticulum, golgi | 92.24 | 88.21 |
| KXG26390 | Sorghum | endoplasmic reticulum, extracellular, golgi | 75.34 | 76.39 |
| Zm00001d003554_P001 | Maize | endoplasmic reticulum, golgi | 72.15 | 75.96 |
| Os04t0445100-01 | Rice | nucleus, plastid | 71.69 | 73.02 |
| Zm00001d025508_P001 | Maize | extracellular | 70.32 | 70.97 |
| GSMUA_Achr8P29100_001 | Banana | endoplasmic reticulum | 52.05 | 57.0 |
| KRG92477 | Soybean | endoplasmic reticulum | 47.03 | 53.65 |
| CDX86006 | Canola | extracellular | 40.64 | 51.74 |
| KRH34328 | Soybean | endoplasmic reticulum | 45.66 | 51.28 |
| Bra027999.1-P | Field mustard | extracellular | 39.27 | 50.0 |
| VIT_18s0089g01270.t01 | Wine grape | endoplasmic reticulum | 42.47 | 50.0 |
| KRH09251 | Soybean | endoplasmic reticulum | 44.75 | 49.75 |
| CDX93767 | Canola | endoplasmic reticulum, extracellular, golgi | 38.81 | 49.42 |
| CDY05088 | Canola | cytosol | 43.84 | 48.73 |
| Bra000703.1-P | Field mustard | extracellular | 43.38 | 48.22 |
| CDX90748 | Canola | extracellular | 43.38 | 48.22 |
| Solyc11g020330.1.1 | Tomato | plastid | 40.64 | 46.84 |
| AT4G10250.1 | Thale cress | endoplasmic reticulum | 41.55 | 46.67 |
| PGSC0003DMT400023932 | Potato | endoplasmic reticulum | 40.64 | 45.18 |
| TraesCS4A01G092600.1 | Wheat | cytosol | 31.51 | 44.52 |
| KRG90262 | Soybean | endoplasmic reticulum | 39.27 | 44.1 |
| TraesCS4A01G092200.1 | Wheat | cytosol | 30.14 | 43.71 |
| TraesCS4A01G092700.1 | Wheat | cytosol | 30.14 | 42.58 |
| TraesCS4A01G092100.1 | Wheat | cytosol | 30.59 | 42.41 |
| TraesCS4A01G092800.1 | Wheat | cytosol | 30.14 | 41.77 |
| TraesCS4A01G092900.1 | Wheat | cytosol | 30.14 | 41.77 |
| TraesCS3A01G034500.1 | Wheat | cytosol | 28.31 | 41.06 |
| TraesCS3A01G034000.1 | Wheat | cytosol | 27.85 | 40.4 |
| TraesCS3A01G033900.1 | Wheat | cytosol | 27.85 | 40.4 |
| TraesCS7A01G183800.1 | Wheat | cytosol | 26.03 | 36.77 |
| TraesCS6A01G087600.1 | Wheat | cytosol | 30.59 | 36.22 |
| TraesCS4A01G226700.1 | Wheat | plastid | 36.53 | 32.26 |
| TraesCS7A01G202200.1 | Wheat | mitochondrion, peroxisome | 20.09 | 31.88 |
| TraesCS3A01G035400.1 | Wheat | cytosol | 21.0 | 27.88 |
| TraesCS3A01G035500.1 | Wheat | mitochondrion, plastid | 22.37 | 23.56 |
Protein Annotations
| MapMan:19.1.8.12 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009628 |
| InterPro:HSP20 | InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | PFAM:PF00011 | PFscan:PS01031 |
| PANTHER:PTHR11527 | PANTHER:PTHR11527:SF135 | SUPFAM:SSF49764 | SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2A01G312900 |
| EnsemblPlants:TraesCS2A01G312900.1 | TIGR:cd06472 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2A:+:537456162..537456821
Molecular Weight (calculated)
23941.4 Da
IEP (calculated)
5.439
GRAVY (calculated)
-0.356
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTRCFLALG CIAVAAMSLA VAPADGAILP WFGSGGGSRG SRDDAVASPL QDVALLADPF RILEHVPFGF DRDDVAMVSM ARVDWRETSD SHEIVVDVPG
101: MRKEDLKVEI EENRVLRISG ERRREVEERK GDHWHREERS YGKFWRQMRL PDNADLDSIA ASLDAGVLTV RFRKLAPEQI KGPRVVGIAG GDDSSAAKKT
201: IGDAGAAGGE ERQTKKVEL
101: MRKEDLKVEI EENRVLRISG ERRREVEERK GDHWHREERS YGKFWRQMRL PDNADLDSIA ASLDAGVLTV RFRKLAPEQI KGPRVVGIAG GDDSSAAKKT
201: IGDAGAAGGE ERQTKKVEL
001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL
Arabidopsis Description
HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.