Factsheet for Solyc11g020330.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
endoplasmic reticulum 7
extracellular 4
vacuole 5
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400023932	Potato	endoplasmic reticulum	91.58	88.32
CDX93767	Canola	endoplasmic reticulum, extracellular, golgi	50.53	55.81
VIT_18s0089g01270.t01	Wine grape	endoplasmic reticulum	53.68	54.84
Bra027999.1-P	Field mustard	extracellular	49.47	54.65
CDX86006	Canola	extracellular	49.47	54.65
KRH34328	Soybean	endoplasmic reticulum	54.74	53.33
KRG92477	Soybean	endoplasmic reticulum	53.16	52.6
KRH09251	Soybean	endoplasmic reticulum	54.21	52.28
Bra000703.1-P	Field mustard	extracellular	51.05	49.24
CDX90748	Canola	extracellular	51.05	49.24
CDY05088	Canola	cytosol	51.05	49.24
AT4G10250.1	Thale cress	endoplasmic reticulum	50.53	49.23
GSMUA_Achr8P29100_001	Banana	endoplasmic reticulum	51.05	48.5
KRG90262	Soybean	endoplasmic reticulum	48.42	47.18
Solyc01g102960.2.1	Tomato	endoplasmic reticulum	43.16	43.39
Solyc06g076570.1.1	Tomato	cytosol, extracellular, nucleus	34.74	42.86
Solyc06g076540.1.1	Tomato	cytosol, nucleus	34.74	42.86
Solyc03g113930.1.1	Tomato	endoplasmic reticulum	42.11	42.55
Solyc06g076520.1.1	Tomato	cytosol, nucleus, plastid	34.21	42.21
Solyc06g076560.1.1	Tomato	cytosol, nucleus	34.21	42.21
KXG26390	Sorghum	endoplasmic reticulum, extracellular, golgi	47.89	42.13
Zm00001d003554_P001	Maize	endoplasmic reticulum, golgi	45.79	41.83
TraesCS2D01G311400.1	Wheat	endoplasmic reticulum, golgi	47.89	41.55
Solyc07g045610.1.1	Tomato	cytosol	16.84	41.03
Solyc09g015020.1.1	Tomato	cytosol, nucleus	33.16	40.91
TraesCS2A01G312900.1	Wheat	endoplasmic reticulum, golgi	46.84	40.64
Solyc09g059210.1.1	Tomato	cytosol, nucleus	14.21	40.3
Os04t0445100-01	Rice	nucleus, plastid	45.26	40.0
Zm00001d025508_P001	Maize	extracellular	45.26	39.63
Solyc09g015000.2.1	Tomato	cytosol	27.89	39.55
HORVU2Hr1G077710.2	Barley	endoplasmic reticulum, golgi	46.32	38.43
Solyc02g093600.2.1	Tomato	cytosol, plastid	26.32	36.76
Solyc04g072250.2.1	Tomato	cytosol	28.42	33.13
Solyc04g014480.2.1	Tomato	mitochondrion	23.68	31.03
Solyc09g011710.2.1	Tomato	cytosol	25.26	23.08
Solyc10g086680.1.1	Tomato	mitochondrion	22.11	17.95

Protein Annotations

MapMan:19.1.8.12	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628
InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	UniProt:K4D6Y5	PFAM:PF00011
PFscan:PS01031	PANTHER:PTHR11527	PANTHER:PTHR11527:SF135	SUPFAM:SSF49764	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc11g020330.1
EnsemblPlants:Solyc11g020330.1.1	UniParc:UPI00027694F6	SEG:seg	:	:	:

Description

22.0 kDa heat shock protein [Source:Projected from Arabidopsis thaliana (AT4G10250) UniProtKB/Swiss-Prot;Acc:Q38806]

Coordinates

chr11:+:10856316..10856888

Molecular Weight (calculated)

21451.8 Da

IEP (calculated)

5.808

GRAVY (calculated)

-0.306

Length

190 amino acids

Sequence
(BLAST)

001: MSVISKLTLL IISIACIFQV SSLSADGSSL VPLIIDQMIS SNPANTFLDP FKVLEQIPFG LENTLLARVD WKETAKGHVI SVEVPGLKKD DIKIEIEENR
101: VLRVSGERKK EEEKNDEENH WHCVERSYGK FWRQFRLPEN ADIDTMKAKL ENGVLTISFA KLSADRIKGP KVVSIESKQQ GKESSVREEL

Best Arabidopsis Sequence Match ( AT4G10250.1 )
(BLAST)

001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL

Arabidopsis Description

HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.