Factsheet for Bra027999.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 5
endoplasmic reticulum 8
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93767	Canola	endoplasmic reticulum, extracellular, golgi	96.51	96.51
CDX86006	Canola	extracellular	91.86	91.86
Bra000703.1-P	Field mustard	extracellular	69.77	60.91
KRH34328	Soybean	endoplasmic reticulum	65.12	57.44
KRH09251	Soybean	endoplasmic reticulum	65.7	57.36
KRG92477	Soybean	endoplasmic reticulum	63.37	56.77
VIT_18s0089g01270.t01	Wine grape	endoplasmic reticulum	60.47	55.91
KRG90262	Soybean	endoplasmic reticulum	57.56	50.77
GSMUA_Achr8P29100_001	Banana	endoplasmic reticulum	57.56	49.5
Solyc11g020330.1.1	Tomato	plastid	54.65	49.47
PGSC0003DMT400023932	Potato	endoplasmic reticulum	55.81	48.73
Bra020295.1-P	Field mustard	cytosol	40.12	45.39
Bra006697.1-P	Field mustard	cytosol	38.95	44.08
Bra018384.1-P	Field mustard	cytosol	39.53	42.77
Bra031725.1-P	Field mustard	cytosol	39.53	42.77
Bra018383.1-P	Field mustard	cytosol	38.37	42.31
Os04t0445100-01	Rice	nucleus, plastid	51.74	41.4
Bra018216.1-P	Field mustard	cytosol	37.21	40.76
Bra002539.1-P	Field mustard	plastid	37.79	40.62
Zm00001d003554_P001	Maize	endoplasmic reticulum, golgi	47.67	39.42
KXG26390	Sorghum	endoplasmic reticulum, extracellular, golgi	49.42	39.35
TraesCS2A01G312900.1	Wheat	endoplasmic reticulum, golgi	50.0	39.27
TraesCS2D01G311400.1	Wheat	endoplasmic reticulum, golgi	50.0	39.27
Zm00001d025508_P001	Maize	extracellular	49.42	39.17
HORVU2Hr1G077710.2	Barley	endoplasmic reticulum, golgi	50.0	37.55
Bra028141.1-P	Field mustard	cytosol	28.49	35.25

Protein Annotations

MapMan:19.1.8.12	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	EnsemblPlantsGene:Bra027999	EnsemblPlants:Bra027999.1	EnsemblPlants:Bra027999.1-P
ncoils:Coil	InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	UniProt:M4EGT4
PFAM:PF00011	PFscan:PS01031	PANTHER:PTHR11527	PANTHER:PTHR11527:SF135	SUPFAM:SSF49764	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0002542200	SEG:seg	:	:	:

Description

AT4G10250 (E=2e-055) ATHSP22.0 | ATHSP22.0

Coordinates

chrA09:+:19538390..19538908

Molecular Weight (calculated)

20147.1 Da

IEP (calculated)

5.915

GRAVY (calculated)

-0.664

Length

172 amino acids

Sequence
(BLAST)

001: MKQFYLALLG LFLITLFFGN IKTTEGSLRD PFRVLEQIPL GLDRDQSMAL SPARVDWKET QEEHVIRLDV PGMKKDEIKI EVEENRVVRI SGERKKEEEK
101: ERDQWHRVER SYGKFWRQFR MPDNVDLDTI KAKLENGVLT VTINKFSTDK VKGPRVVDIE FEEDQTGKFS SG

Best Arabidopsis Sequence Match ( AT4G10250.1 )
(BLAST)

001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL

Arabidopsis Description

HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.