Factsheet for Bra028141.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra016728.1-P
Bra036240.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G37670.1	Bra036240.1-P	AT1G03130.1	21798944
AT5G37670.1	Bra016728.1-P	AT1G13520.1	21798944
AT5G37670.1	Bra000214.1-P	AT2G41090.1	17360592
AT5G37670.1	Bra036240.1-P	AT4G02770.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60723	Canola	cytosol	100.0	100.0
CDY01718	Canola	cytosol	97.84	97.84
AT5G37670.1	Thale cress	cytosol	84.17	85.4
KRH17351	Soybean	mitochondrion	69.06	66.67
KRH72979	Soybean	cytosol, mitochondrion, peroxisome	66.91	64.58
PGSC0003DMT400060736	Potato	mitochondrion	66.19	63.45
Solyc04g014480.2.1	Tomato	mitochondrion	65.47	62.76
VIT_13s0019g00860.t01	Wine grape	cytosol	60.43	59.15
GSMUA_Achr9P27260_001	Banana	peroxisome	49.64	47.59
TraesCS7D01G205400.1	Wheat	nucleus	46.76	47.1
TraesCS7B01G109100.1	Wheat	mitochondrion, peroxisome	46.76	47.1
TraesCS7A01G202200.1	Wheat	mitochondrion, peroxisome	46.76	47.1
EER89539	Sorghum	mitochondrion	48.92	45.95
Zm00001d044728_P001	Maize	mitochondrion	46.76	44.52
Os06t0253100-01	Rice	mitochondrion	46.76	44.52
Bra020295.1-P	Field mustard	cytosol	43.88	40.13
Bra006697.1-P	Field mustard	cytosol	43.88	40.13
HORVU0Hr1G020420.1	Barley	plastid	48.2	39.18
Bra018383.1-P	Field mustard	cytosol	43.88	39.1
Bra018216.1-P	Field mustard	cytosol	43.17	38.22
Bra002539.1-P	Field mustard	plastid	43.88	38.12
Bra031725.1-P	Field mustard	cytosol	43.17	37.74
Bra018384.1-P	Field mustard	cytosol	43.17	37.74
Bra027999.1-P	Field mustard	extracellular	35.25	28.49
Bra000703.1-P	Field mustard	extracellular	35.97	25.38

Protein Annotations

MapMan:19.1.8.10	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	EnsemblPlantsGene:Bra028141	EnsemblPlants:Bra028141.1	EnsemblPlants:Bra028141.1-P
GO:GO:0000302	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777
GO:GO:0005782	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628
GO:GO:0009987	InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	UniProt:M4EH76
PFAM:PF00011	PFscan:PS01031	PANTHER:PTHR11527	PANTHER:PTHR11527:SF142	SUPFAM:SSF49764	UniParc:UPI00025443CC
SEG:seg	:	:	:	:	:

Description

AT5G37670 (E=3e-052) | 15.7 kDa class I-related small heat shock protein-like (HSP15.7-CI)

Coordinates

chrA04:+:6065828..6066682

Molecular Weight (calculated)

15965.1 Da

IEP (calculated)

8.873

GRAVY (calculated)

-0.565

Length

139 amino acids

Sequence
(BLAST)

001: MADGIFWYPF RRFREWSGGS TALIDWMESP NAHIFKVNVP GYNKEDIKVQ IEEGNVLSIK GEGLKKEEKE KKEDLVWHVA EREAFSSKGE FLRRIELPEN
101: VKTDQVKAYV DNGLLTVVVP KDTSPKSSKV RNINIISKL

Best Arabidopsis Sequence Match ( AT5G37670.1 )
(BLAST)

001: MADRGIFLYP FRRFQEWSRS TALIDWMESN NSHIFKINVP GYNKEDIKVQ IEEGNVLSIR GEGIKEEKKE NLVWHVAERE AFSGGGSEFL RRIELPENVK
101: VDQVKAYVEN GVLTVVVPKD TSSKSSKVRN VNITSKL

Arabidopsis Description

HSP15.715.7 kDa heat shock protein, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q9FHQ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.