Factsheet for Bra018384.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031725.1-P	Field mustard	cytosol	100.0	100.0
CDY45447	Canola	cytosol	99.37	99.37
Bra018383.1-P	Field mustard	cytosol	86.79	88.46
AT2G29500.1	Thale cress	cytosol	82.39	85.62
KRH53964	Soybean	cytosol	69.18	73.33
KRH42105	Soybean	cytosol	70.44	73.2
KRH42102	Soybean	cytosol	70.44	73.2
KRH50105	Soybean	cytosol	68.55	71.24
KRH20402	Soybean	cytosol	68.55	70.78
KRH50107	Soybean	cytosol	67.92	70.59
KRH42103	Soybean	cytosol	67.92	70.59
KRH20403	Soybean	cytosol	71.07	70.19
KRH20397	Soybean	cytosol	67.92	70.13
PGSC0003DMT400078008	Potato	cytosol	67.92	70.13
KRH50104	Soybean	endoplasmic reticulum	70.44	69.57
KRH63973	Soybean	cytosol	61.64	69.5
Solyc06g076570.1.1	Tomato	cytosol, extracellular, nucleus	67.3	69.48
Solyc06g076560.1.1	Tomato	cytosol, nucleus	67.3	69.48
KRH50102	Soybean	cytosol	66.67	69.28
KRH20400	Soybean	cytosol	66.67	68.83
PGSC0003DMT400078006	Potato	cytosol	66.67	68.83
Solyc06g076540.1.1	Tomato	cytosol, nucleus	66.67	68.83
Solyc06g076520.1.1	Tomato	cytosol, nucleus, plastid	66.67	68.83
PGSC0003DMT400078201	Potato	cytosol	66.67	68.83
KRH50109	Soybean	cytosol	66.04	68.63
PGSC0003DMT400078202	Potato	cytosol	65.41	67.53
PGSC0003DMT400078007	Potato	cytosol	65.41	67.53
Bra020295.1-P	Field mustard	cytosol	63.52	66.45
KRH20405	Soybean	cytosol	63.52	66.45
PGSC0003DMT400038705	Potato	cytosol	55.35	66.17
Solyc09g059210.1.1	Tomato	cytosol, nucleus	27.67	65.67
Bra002539.1-P	Field mustard	plastid	66.04	65.62
Bra018216.1-P	Field mustard	cytosol	64.78	65.61
Bra006697.1-P	Field mustard	cytosol	62.26	65.13
KRH15020	Soybean	cytosol	64.78	64.78
KRH57663	Soybean	cytosol	54.09	63.24
Solyc07g045610.1.1	Tomato	cytosol	30.19	61.54
Bra028141.1-P	Field mustard	cytosol	37.74	43.17
Bra027999.1-P	Field mustard	extracellular	42.77	39.53
Bra000703.1-P	Field mustard	extracellular	44.03	35.53

Protein Annotations

EnsemblPlants:Bra018384.1	EnsemblPlants:Bra018384.1-P	EnsemblPlantsGene:Bra018384	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20
InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	ncoils:Coil	PANTHER:PTHR11527	PANTHER:PTHR11527:SF190
PFAM:PF00011	PFscan:PS01031	SEG:seg	SUPFAM:SSF49764	UniParc:UPI000254315C	UniProt:M4DPE3
MapMan:19.1.8.1	:	:	:	:	:

Description

AT2G29500 (E=3e-053) | 17.6 kDa class I small heat shock protein (HSP17.6B-CI)

Coordinates

chrA05:+:7862983..7863462

Molecular Weight (calculated)

17994.0 Da

IEP (calculated)

6.817

GRAVY (calculated)

-0.640

Length

159 amino acids

Sequence
(BLAST)

001: MSMIPSFFGN NRRGSSSSSF FDPFSLDVWD PFKDFPSSSS SFSRENSVIV NARVDWRETP EAHVFKADLP GLKKEEVKVE VEDNNVLKIS GERHVEKEDK
101: SDTWHRVERS SGQFTRKFRL PENVKMDQVK AALENGVLTV TVPKVEAEKA SVRSVQISG

Best Arabidopsis Sequence Match ( AT2G29500.1 )
(BLAST)

001: MSMIPSFFNN NRRSNIFDPF SLDVWDPFKE LTSSSLSREN SAIVNARVDW RETPEAHVFK ADLPGLKKEE VKVEIEEDSV LKISGERHVE KEDKNDTWHR
101: VERSSGQFTR RFRLPENVKM DQVKAAMENG VLTVTVPKAE TKKADVKSIQ ISG

Arabidopsis Description

HSP17.6B17.6 kDa class I heat shock protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.