CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42105	Soybean	cytosol	97.39	97.39
KRH42103	Soybean	cytosol	94.77	94.77
KRH50105	Soybean	cytosol	90.85	90.85
KRH50107	Soybean	cytosol	90.2	90.2
KRH50109	Soybean	cytosol	90.2	90.2
KRH20402	Soybean	cytosol	89.54	88.96
KRH20397	Soybean	cytosol	88.89	88.31
KRH50102	Soybean	cytosol	88.24	88.24
KRH53964	Soybean	cytosol	85.62	87.33
KRH50104	Soybean	endoplasmic reticulum	90.2	85.71
KRH20400	Soybean	cytosol	85.62	85.06
KRH20403	Soybean	cytosol	88.89	84.47
KRH63973	Soybean	cytosol	77.12	83.69
KRH20405	Soybean	cytosol	83.01	83.55
PGSC0003DMT400078008	Potato	cytosol	83.66	83.12
Solyc06g076570.1.1	Tomato	cytosol, extracellular, nucleus	82.35	81.82
PGSC0003DMT400078006	Potato	cytosol	81.7	81.17
PGSC0003DMT400078007	Potato	cytosol	81.05	80.52
Solyc06g076540.1.1	Tomato	cytosol, nucleus	81.05	80.52
PGSC0003DMT400038705	Potato	cytosol	69.28	79.7
PGSC0003DMT400078201	Potato	cytosol	79.74	79.22
PGSC0003DMT400078202	Potato	cytosol	79.74	79.22
Solyc06g076560.1.1	Tomato	cytosol, nucleus	79.74	79.22
Solyc06g076520.1.1	Tomato	cytosol, nucleus, plastid	79.08	78.57
CDY53371	Canola	cytosol	79.74	78.21
CDY45448	Canola	cytosol	79.74	78.21
Bra018383.1-P	Field mustard	cytosol	79.08	77.56
AT2G29500.1	Thale cress	cytosol	76.47	76.47
CDX97881	Canola	cytosol	75.82	75.82
KRH57663	Soybean	cytosol	67.32	75.74
CDY51363	Canola	cytosol	75.16	75.66
AT1G07400.1	Thale cress	cytosol	75.82	73.89
AT1G59860.1	Thale cress	cytosol	74.51	73.55
KRH15019	Soybean	cytosol, endoplasmic reticulum	74.51	72.61
KRH15020	Soybean	cytosol	75.16	72.33
KRH73111	Soybean	cytosol, endoplasmic reticulum, nucleus	71.9	71.9
CDY53372	Canola	cytosol, plastid	72.55	71.61
Bra018384.1-P	Field mustard	cytosol	73.2	70.44
Bra031725.1-P	Field mustard	cytosol	73.2	70.44
CDY45447	Canola	cytosol	73.2	70.44
KRH75757	Soybean	cytosol	65.36	69.44
KRH50108	Soybean	cytosol, plastid	45.1	50.0
KRH70223	Soybean	cytosol, nucleus	45.75	45.75
KRH72979	Soybean	cytosol, mitochondrion, peroxisome	41.83	44.44
KRH49235	Soybean	cytosol	45.1	44.23
KRH17351	Soybean	mitochondrion	41.18	43.75
KRH00090	Soybean	cytosol	47.71	42.69
KRH24720	Soybean	cytosol	36.6	40.58
KRH29724	Soybean	cytosol, plastid	38.56	39.86
KRG92477	Soybean	endoplasmic reticulum	48.37	38.54
KRH34328	Soybean	endoplasmic reticulum	49.02	38.46
KRH13798	Soybean	cytosol	41.18	37.5
KRH62434	Soybean	cytosol	37.25	36.31
KRG93360	Soybean	endoplasmic reticulum	46.41	36.04
KRH09251	Soybean	endoplasmic reticulum	45.75	35.53
KRH18614	Soybean	endoplasmic reticulum	45.75	35.35
KRG90262	Soybean	endoplasmic reticulum	41.18	32.31

Protein Annotations

EntrezGene:100527912	MapMan:19.1.8.1	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	EMBL:ACUP02004789	EMBL:BT092807
UniProt:C6T5U3	EnsemblPlantsGene:GLYMA_08G068700	InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978
EnsemblPlants:KRH42102	ProteinID:KRH42102	ProteinID:KRH42102.1	PFAM:PF00011	PFscan:PS01031	PANTHER:PTHR11527
PANTHER:PTHR11527:SF190	SUPFAM:SSF49764	UniParc:UPI0001B15F7C	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:5268246..5269054

Molecular Weight (calculated)

17485.7 Da

IEP (calculated)

5.871

GRAVY (calculated)

-0.624

Length

153 amino acids

Sequence
(BLAST)

001: MSLIPSFFGG RRSSVFDPFS LDVWEPFKDF PFPSSLSAEN SAFVSTRVDW KETPEAHVFK ADIPGLKKEE VKLEIQDDRV LQISGERNVE KEDKNDTWHR
101: VERSSGKFMR RFRLPENAKV DQVKASMENG VLTVTVPKEE IKKPDVKAID ISG

Best Arabidopsis Sequence Match ( AT1G07400.1 )
(BLAST)

001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG

Arabidopsis Description

HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.