CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75757	Soybean	cytosol	37.58	40.97
KRH49235	Soybean	cytosol	40.13	40.38
GSMUA_Achr9P03540_001	Banana	cytosol	40.13	39.38
KRH15019	Soybean	cytosol, endoplasmic reticulum	38.22	38.22
GSMUA_Achr6P33860_001	Banana	cytosol	40.13	38.18
KRH20405	Soybean	cytosol	36.94	38.16
KRH00090	Soybean	cytosol	41.4	38.01
KRH73111	Soybean	cytosol, endoplasmic reticulum, nucleus	36.94	37.91
KRH50105	Soybean	cytosol	36.94	37.91
KRH20403	Soybean	cytosol	38.22	37.27
KRH42105	Soybean	cytosol	36.31	37.25
KRH42102	Soybean	cytosol	36.31	37.25
KRH50104	Soybean	endoplasmic reticulum	37.58	36.65
KRH42103	Soybean	cytosol	35.67	36.6
KRH20397	Soybean	cytosol	35.67	36.36
KRH20402	Soybean	cytosol	35.67	36.36
KRH50109	Soybean	cytosol	35.03	35.95
KRH50107	Soybean	cytosol	35.03	35.95
KRH20400	Soybean	cytosol	35.03	35.71
KRH53964	Soybean	cytosol	33.76	35.33
KRH50102	Soybean	cytosol	34.39	35.29
KRH15020	Soybean	cytosol	35.67	35.22
KRH57663	Soybean	cytosol	29.94	34.56
VIT_13s0019g03170.t01	Wine grape	cytosol	33.76	33.33
KRH63973	Soybean	cytosol	29.94	33.33
GSMUA_Achr7P14910_001	Banana	cytosol	34.39	32.14
KRH50108	Soybean	cytosol, plastid	27.39	31.16
GSMUA_Achr8P00290_001	Banana	cytosol	28.66	31.03
KRH17351	Soybean	mitochondrion	28.03	30.56
KRH72979	Soybean	cytosol, mitochondrion, peroxisome	28.03	30.56
KRH70223	Soybean	cytosol, nucleus	26.75	27.45
KRH24720	Soybean	cytosol	22.93	26.09
EES02533	Sorghum	cytosol	27.39	26.06
Os01t0135900-02	Rice	plasma membrane	27.39	25.9
KRH29724	Soybean	cytosol, plastid	24.2	25.68
HORVU3Hr1G006930.1	Barley	cytosol	26.11	24.85
PGSC0003DMT400030603	Potato	cytosol	29.3	23.83
KRG92477	Soybean	endoplasmic reticulum	28.66	23.44
KRH34328	Soybean	endoplasmic reticulum	28.66	23.08
TraesCS3A01G035400.1	Wheat	cytosol	24.2	23.03
TraesCS3B01G048800.1	Wheat	cytosol	24.2	23.03
Zm00001d039941_P001	Maize	cytosol	24.2	22.89
TraesCS3B01G048700.1	Wheat	cytosol	23.57	22.56
KRH09251	Soybean	endoplasmic reticulum	28.03	22.34
PGSC0003DMT400049226	Potato	cytosol	27.39	22.05
Solyc09g011710.2.1	Tomato	cytosol	28.66	21.63
KRH13798	Soybean	cytosol	22.93	21.43
KRG93360	Soybean	endoplasmic reticulum	26.75	21.32
KRH18614	Soybean	endoplasmic reticulum	26.75	21.21
KRG90262	Soybean	endoplasmic reticulum	24.84	20.0
TraesCS3A01G035500.1	Wheat	mitochondrion, plastid	24.2	18.27
PGSC0003DMT400049225	Potato	mitochondrion	26.11	17.52
Solyc10g086680.1.1	Tomato	mitochondrion	26.11	17.52
HORVU3Hr1G006940.2	Barley	cytosol	23.57	15.23

Protein Annotations

EMBL:ACUP02002271	EnsemblPlants:KRH62434	EnsemblPlantsGene:GLYMA_04G108500	EntrezGene:100817672	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom
InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF190
PFAM:PF00011	PFscan:PS01031	ProteinID:KRH62434	ProteinID:KRH62434.1	SEG:seg	SUPFAM:SSF49764
UniParc:UPI00023C1098	UniProt:K7KDM2	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:11551408..11552157

Molecular Weight (calculated)

17995.7 Da

IEP (calculated)

9.805

GRAVY (calculated)

-0.570

Length

157 amino acids

Sequence
(BLAST)

001: MPFLPSSLFG PQYDHPPHHY IAKPFQTHPT PPNHYIAKPL QFGPTQKTFH LPISGGTSPI VVNAYVEWKE TPTAHVYKAH VPGLRHNEVR VEVENGRELC
101: IIGEKWVERE TRNGRGQLLE RARGRFIQTL MLPENSNVHR MKAYMENGAL VINVPKY

Best Arabidopsis Sequence Match ( AT1G53540.1 )
(BLAST)

001: MSLIPSIFGG RRTNVFDPFS LDVFDPFEGF LTPSGLANAP AMDVAAFTNA KVDWRETPEA HVFKADLPGL RKEEVKVEVE DGNILQISGE RSNENEEKND
101: KWHRVERSSG KFTRRFRLPE NAKMEEIKAS MENGVLSVTV PKVPEKKPEV KSIDISG

Arabidopsis Description

HSP17.6C17.6 kDa class I heat shock protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P13853]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.