Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G048800.1 | Wheat | cytosol | 92.07 | 91.52 |
| HORVU3Hr1G006930.1 | Barley | cytosol | 90.24 | 89.7 |
| TraesCS3A01G035500.1 | Wheat | mitochondrion, plastid | 93.9 | 74.04 |
| Os01t0135900-02 | Rice | plasma membrane | 67.07 | 66.27 |
| EES02533 | Sorghum | cytosol | 64.02 | 63.64 |
| Zm00001d039941_P001 | Maize | cytosol | 62.8 | 62.05 |
| HORVU3Hr1G006940.2 | Barley | cytosol | 78.05 | 52.67 |
| TraesCS4B01G212300.1 | Wheat | cytosol | 42.07 | 44.52 |
| TraesCS4B01G212200.1 | Wheat | cytosol | 42.07 | 43.95 |
| TraesCS3B01G049900.1 | Wheat | cytosol | 40.24 | 43.71 |
| TraesCS3B01G049800.1 | Wheat | cytosol | 40.24 | 43.71 |
| TraesCS5B01G245700.1 | Wheat | cytosol | 40.85 | 43.51 |
| TraesCS4B01G211600.1 | Wheat | cytosol | 40.24 | 42.04 |
| GSMUA_Achr6P33860_001 | Banana | cytosol | 41.46 | 41.21 |
| GSMUA_Achr9P03540_001 | Banana | cytosol | 39.63 | 40.62 |
| VIT_13s0019g03170.t01 | Wine grape | cytosol | 38.41 | 39.62 |
| TraesCS4B01G211700.1 | Wheat | cytosol | 29.27 | 38.71 |
| GSMUA_Achr7P14910_001 | Banana | cytosol | 34.76 | 33.93 |
| TraesCS3B01G048600.1 | Wheat | cytosol | 30.49 | 32.47 |
| GSMUA_Achr8P00290_001 | Banana | cytosol | 27.44 | 31.03 |
| TraesCS7B01G088700.1 | Wheat | cytosol | 29.88 | 31.01 |
| TraesCS7B01G088600.1 | Wheat | cytosol | 29.88 | 31.01 |
| KRH49235 | Soybean | cytosol | 25.61 | 26.92 |
| TraesCS7B01G109100.1 | Wheat | mitochondrion, peroxisome | 22.56 | 26.81 |
| KRH00090 | Soybean | cytosol | 27.44 | 26.32 |
| PGSC0003DMT400049226 | Potato | cytosol | 29.88 | 25.13 |
| Solyc09g011710.2.1 | Tomato | cytosol | 31.1 | 24.52 |
| PGSC0003DMT400030603 | Potato | cytosol | 28.66 | 24.35 |
| TraesCS6B01G110200.1 | Wheat | mitochondrion | 27.44 | 24.19 |
| KRH62434 | Soybean | cytosol | 22.56 | 23.57 |
| TraesCS4B01G089800.1 | Wheat | endoplasmic reticulum | 28.66 | 23.15 |
| PGSC0003DMT400049225 | Potato | mitochondrion | 29.27 | 20.51 |
| Solyc10g086680.1.1 | Tomato | mitochondrion | 28.66 | 20.09 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G048700.1 | EnsemblPlantsGene:TraesCS3B01G048700 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 | InterPro:HSP20-like_chaperone |
| InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF141 | PFAM:PF00011 | PFscan:PS01031 |
| SEG:seg | SUPFAM:SSF49764 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3B:+:24749736..24750230
Molecular Weight (calculated)
17666.8 Da
IEP (calculated)
4.451
GRAVY (calculated)
-0.014
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLVRFFDTL ALDAWNPFGS IFGTTASSGT DAWLASDTTA FADTYIESRE TAEAYVFSTR LPAGVTKEEV KVEVEEEGKV LVIAGERCLR REAKSETRHH
101: VERSSATFFG RFHLPDDAAL GQVRAAMDDG GAQLTVTVPR VGAAVPVTMP EPAVAIEVVE VSPC
101: VERSSATFFG RFHLPDDAAL GQVRAAMDDG GAQLTVTVPR VGAAVPVTMP EPAVAIEVVE VSPC
001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG
Arabidopsis Description
HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.