Factsheet for HORVU3Hr1G006930.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G035400.1	Wheat	cytosol	90.3	90.3
TraesCS3B01G048700.1	Wheat	cytosol	89.7	90.24
TraesCS3B01G048800.1	Wheat	cytosol	87.88	87.88
TraesCS3A01G035500.1	Wheat	mitochondrion, plastid	87.88	69.71
EES02533	Sorghum	cytosol	67.88	67.88
Os01t0135900-02	Rice	plasma membrane	67.88	67.47
Zm00001d039941_P001	Maize	cytosol	65.45	65.06
HORVU3Hr1G006940.2	Barley	cytosol	83.03	56.38
HORVU4Hr1G060760.1	Barley	cytosol	37.58	41.33
HORVU4Hr1G060720.2	Barley	cytosol	39.39	41.14
GSMUA_Achr6P33860_001	Banana	cytosol	40.0	40.0
GSMUA_Achr9P03540_001	Banana	cytosol	38.18	39.38
VIT_13s0019g03170.t01	Wine grape	cytosol	36.97	38.36
HORVU3Hr1G007380.1	Barley	mitochondrion	41.21	34.87
HORVU3Hr1G006530.1	Barley	cytosol	41.82	32.86
GSMUA_Achr7P14910_001	Banana	cytosol	33.33	32.74
HORVU3Hr1G007500.4	Barley	cytosol, plastid	41.82	31.94
GSMUA_Achr8P00290_001	Banana	cytosol	26.67	30.34
HORVU2Hr1G120170.1	Barley	cytosol	41.82	27.82
KRH49235	Soybean	cytosol	26.06	27.56
KRH00090	Soybean	cytosol	27.27	26.32
KRH62434	Soybean	cytosol	24.85	26.11
HORVU6Hr1G015130.1	Barley	cytosol	27.88	25.99
PGSC0003DMT400049226	Potato	cytosol	30.3	25.64
PGSC0003DMT400030603	Potato	cytosol	27.88	23.83
Solyc09g011710.2.1	Tomato	cytosol	29.7	23.56
HORVU0Hr1G020420.1	Barley	plastid	23.03	22.22
HORVU2Hr1G077710.2	Barley	endoplasmic reticulum, golgi	29.09	20.96
PGSC0003DMT400049225	Potato	mitochondrion	29.7	20.94
Solyc10g086680.1.1	Tomato	mitochondrion	29.09	20.51
HORVU4Hr1G015170.1	Barley	cytosol, endoplasmic reticulum	29.7	20.42

Protein Annotations

EMBL:AK370196	EnsemblPlants:HORVU3Hr1G006930.1	EnsemblPlantsGene:HORVU3Hr1G006930	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20
InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF141	PFAM:PF00011
PFscan:PS01031	SEG:seg	SUPFAM:SSF49764	UniParc:UPI000200788F	UniProt:F2E225	MapMan:35.1

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E225]

Coordinates

chrchr3H:+:16623930..16625127

Molecular Weight (calculated)

17648.7 Da

IEP (calculated)

4.484

GRAVY (calculated)

-0.053

Length

165 amino acids

Sequence
(BLAST)

001: MSMVRFLDTL ALDSWNPFGS IFGTTASGGA DAWLASDTTA FADTYIESRE TAEAYVFSAR LPAGVTKEEV KVEVEEEGKV LVIAGERTLR REAKNETRHH
101: VERSCATFFG RFHLPEDAAL GRVRAAMDDG GAQLTVTVPR VGAAAAAEAM PEPAVAIEVV EASPC

Best Arabidopsis Sequence Match ( AT1G07400.1 )
(BLAST)

001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG

Arabidopsis Description

HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.