Factsheet for GSMUA_Achr7P14910_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P03540_001	Banana	cytosol	62.5	65.62
VIT_13s0019g03170.t01	Wine grape	cytosol	60.71	64.15
GSMUA_Achr9P00510_001	Banana	cytosol	58.33	62.42
GSMUA_Achr1P21160_001	Banana	cytosol	57.14	61.54
GSMUA_Achr6P33860_001	Banana	cytosol	60.12	61.21
GSMUA_Achr5P17640_001	Banana	cytosol	30.36	57.3
GSMUA_Achr8P00290_001	Banana	cytosol	45.83	53.1
GSMUA_Achr1P21150_001	Banana	cytosol	44.64	46.3
KRH00090	Soybean	cytosol	38.69	38.01
KRH49235	Soybean	cytosol	35.12	37.82
EES02533	Sorghum	cytosol	35.71	36.36
Os01t0135900-02	Rice	plasma membrane	35.71	36.14
PGSC0003DMT400030603	Potato	cytosol	40.48	35.23
Zm00001d039941_P001	Maize	cytosol	34.52	34.94
TraesCS3B01G048700.1	Wheat	cytosol	33.93	34.76
TraesCS3A01G035400.1	Wheat	cytosol	33.93	34.55
GSMUA_Achr8P29100_001	Banana	endoplasmic reticulum	41.07	34.5
GSMUA_Achr9P27260_001	Banana	peroxisome	29.76	34.48
KRH62434	Soybean	cytosol	32.14	34.39
HORVU3Hr1G006930.1	Barley	cytosol	32.74	33.33
TraesCS3B01G048800.1	Wheat	cytosol	32.74	33.33
Solyc09g011710.2.1	Tomato	cytosol	41.07	33.17
GSMUA_Achr10P...	Banana	endoplasmic reticulum, golgi	37.5	32.98
PGSC0003DMT400049226	Potato	cytosol	36.9	31.79
TraesCS3A01G035500.1	Wheat	mitochondrion, plastid	33.93	27.4
PGSC0003DMT400049225	Potato	mitochondrion	38.1	27.35
Solyc10g086680.1.1	Tomato	mitochondrion	38.1	27.35
HORVU3Hr1G006940.2	Barley	cytosol	29.76	20.58

Protein Annotations

EnsemblPlants:GSMUA_Achr7P14910_001	EnsemblPlants:GSMUA_Achr7T14910_001	EnsemblPlantsGene:GSMUA_Achr7G14910_001	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20
InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF240	PFAM:PF00011
PFscan:PS01031	SEG:seg	SUPFAM:SSF49764	UniParc:UPI000296E7A5	UniProt:M0THM8	MapMan:19.1.8.1

Description

18.2 kDa class I heat shock protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G14910_001]

Coordinates

chr7:+:11985540..11986240

Molecular Weight (calculated)

18587.2 Da

IEP (calculated)

5.351

GRAVY (calculated)

-0.362

Length

168 amino acids

Sequence
(BLAST)

001: MALIPGGFGF GSRRINAFDP FFPDPWDSLD GFTLGPSSPL LSLPRPSPLY FPSESSALVG ARVDWKETPE AHVFKADLPG LKKDELKVEV EDGRILQISG
101: ERKIDKEEGT DNWHCVERSS GKFLQRFRLP ETARVDQVRA AMKDGVLTVT VPKADIKKCD ITSIEISG

Best Arabidopsis Sequence Match ( AT2G29500.1 )
(BLAST)

001: MSMIPSFFNN NRRSNIFDPF SLDVWDPFKE LTSSSLSREN SAIVNARVDW RETPEAHVFK ADLPGLKKEE VKVEIEEDSV LKISGERHVE KEDKNDTWHR
101: VERSSGQFTR RFRLPENVKM DQVKAAMENG VLTVTVPKAE TKKADVKSIQ ISG

Arabidopsis Description

HSP17.6B17.6 kDa class I heat shock protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.