Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
- peroxisome 4
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G205400.1 | Wheat | nucleus | 55.86 | 58.7 |
| TraesCS7A01G202200.1 | Wheat | mitochondrion, peroxisome | 55.86 | 58.7 |
| Os06t0253100-01 | Rice | mitochondrion | 58.62 | 58.22 |
| EER89539 | Sorghum | mitochondrion | 59.31 | 58.11 |
| TraesCS7B01G109100.1 | Wheat | mitochondrion, peroxisome | 54.48 | 57.25 |
| Zm00001d044728_P001 | Maize | mitochondrion | 57.24 | 56.85 |
| PGSC0003DMT400060736 | Potato | mitochondrion | 52.41 | 52.41 |
| AT5G37670.1 | Thale cress | cytosol | 48.97 | 51.82 |
| Solyc04g014480.2.1 | Tomato | mitochondrion | 51.03 | 51.03 |
| KRH72979 | Soybean | cytosol, mitochondrion, peroxisome | 50.34 | 50.69 |
| Bra028141.1-P | Field mustard | cytosol | 47.59 | 49.64 |
| CDY60723 | Canola | cytosol | 47.59 | 49.64 |
| CDY01718 | Canola | cytosol | 47.59 | 49.64 |
| KRH17351 | Soybean | mitochondrion | 48.97 | 49.31 |
| VIT_13s0019g00860.t01 | Wine grape | cytosol | 48.28 | 49.3 |
| HORVU0Hr1G020420.1 | Barley | plastid | 55.17 | 46.78 |
| GSMUA_Achr9P00510_001 | Banana | cytosol | 37.24 | 34.39 |
| GSMUA_Achr9P03540_001 | Banana | cytosol | 36.55 | 33.12 |
| GSMUA_Achr1P21160_001 | Banana | cytosol | 35.17 | 32.69 |
| GSMUA_Achr6P33860_001 | Banana | cytosol | 34.48 | 30.3 |
| GSMUA_Achr7P14910_001 | Banana | cytosol | 34.48 | 29.76 |
| GSMUA_Achr1P21150_001 | Banana | cytosol | 32.41 | 29.01 |
| GSMUA_Achr5P17640_001 | Banana | cytosol | 17.24 | 28.09 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 35.17 | 26.7 |
| GSMUA_Achr8P00290_001 | Banana | cytosol | 25.52 | 25.52 |
| GSMUA_Achr8P29100_001 | Banana | endoplasmic reticulum | 29.66 | 21.5 |
Protein Annotations
| MapMan:19.1.8.10 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | GO:GO:0000302 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0005782 | GO:GO:0006457 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009628 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr9G27260_001 | EnsemblPlants:GSMUA_Achr9P27260_001 |
| EnsemblPlants:GSMUA_Achr9T27260_001 | InterPro:HSP20 | InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | UniProt:M0U3Y3 |
| PFAM:PF00011 | PFscan:PS01031 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF142 | SUPFAM:SSF49764 | UniParc:UPI0002948104 |
| SEG:seg | : | : | : | : | : |
Description
16.0 kDa heat shock protein, peroxisomal [Source:GMGC_GENE;Acc:GSMUA_Achr9G27260_001]
Coordinates
chr9:+:31490439..31491188
Molecular Weight (calculated)
15964.9 Da
IEP (calculated)
6.266
GRAVY (calculated)
-0.359
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSTFFGDP FRRFFWSPLV WSGSPSAPAA MDWLETPSSH IFKIDVPGSG RDDVEVQLEE GNVISIRSEG SSATTAKEEQ QLKEVVWHVA ERGRGSFSRQ
101: IALPDNVRAD QIKAHVENGV LTVVVPKEPI PPKPKPRTIA VSSKL
101: IALPDNVRAD QIKAHVENGV LTVVVPKEPI PPKPKPRTIA VSSKL
001: MADRGIFLYP FRRFQEWSRS TALIDWMESN NSHIFKINVP GYNKEDIKVQ IEEGNVLSIR GEGIKEEKKE NLVWHVAERE AFSGGGSEFL RRIELPENVK
101: VDQVKAYVEN GVLTVVVPKD TSSKSSKVRN VNITSKL
101: VDQVKAYVEN GVLTVVVPKD TSSKSSKVRN VNITSKL
Arabidopsis Description
HSP15.715.7 kDa heat shock protein, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q9FHQ3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.